Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02600 ATGCAAGCTCTAATGAGGCACAAACTCAAACTCTGCAATTCTACCTTCAATTCTCTCTTCAgactttcttcatcatcatcctgTTTTCATTCTTCTTCCTCTCCGCTAAACTCATCACCACTTTCTGTTTCCGCTCATTCCACCGCCACCAACTCGTTCACCACTCCATGGTTCACCATTCAACGACGTGGAAACAGAGTCCATGCTTCTGATATCAGAGTCGGAAATACCATCGGAAAACAAGGGCGAATCTATGAGGTTCTTAAAGTAGATCACTCTCATGAAGGAAGAGGAAAAGCCACAATCAAGGTGGAACTTCGTGACCTTATCCAGGGAACCAAGGTATCACAAAGATTGGGCCCTGATGAAGATGTTGAAAAGGCCTATCTTCAGGAAAAGACTTTCATGTACATGTGCACAGATCAAGATGGAACTGTAGTATTAATGGACACTGATACGTTCGATCAAATTGAAGTTTCCAAAGACTTGTTTGGCAAGAATGGTTCATATATACGAGATGAAATGAAAGTTAAGGTACAATTTTATGAAGACAAACCTTTATCTGCATCAGTTCCAAAACGTGTAATATGTACTGTCAAGGAAGTGATTGCAGCCACTCCGAGGAATAAAAAGGTAATACTGGACAATGGCCCTACAATTGAAGTTCCGCCTCACATTGTTGCCGGTGATGCCATTCTTGTTAATACAGAGGACGACTGTTACATTGAAAGGGCTAAGGCATAG 744 0.4046 MQALMRHKLKLCNSTFNSLFRLSSSSSCFHSSSSPLNSSPLSVSAHSTATNSFTTPWFTIQRRGNRVHASDIRVGNTIGKQGRIYEVLKVDHSHEGRGKATIKVELRDLIQGTKVSQRLGPDEDVEKAYLQEKTFMYMCTDQDGTVVLMDTDTFDQIEVSKDLFGKNGSYIRDEMKVKVQFYEDKPLSASVPKRVICTVKEVIAATPRNKKVILDNGPTIEVPPHIVAGDAILVNTEDDCYIERAKA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02600 247 SMART Elong_fact_P_C_2 195 244 IPR015365 GO:0005737|GO:0043043
Tsu07g02600 247 PANTHER ELONGATION FACTOR P (EF-P) FAMILY PROTEIN 18 245 - -
Tsu07g02600 247 Gene3D - 129 192 IPR012340 -
Tsu07g02600 247 PANTHER ELONGATION FACTOR P 18 245 IPR020599 -
Tsu07g02600 247 ProSitePatterns Elongation factor P signature. 210 229 IPR013852 -
Tsu07g02600 247 Gene3D - 67 127 IPR014722 -
Tsu07g02600 247 SMART EFP_2 132 187 IPR001059 GO:0003746|GO:0006414
Tsu07g02600 247 SUPERFAMILY Nucleic acid-binding proteins 131 192 IPR012340 -
Tsu07g02600 247 Pfam Elongation factor P (EF-P) KOW-like domain 69 125 IPR013185 -
Tsu07g02600 247 Gene3D - 195 247 IPR012340 -
Tsu07g02600 247 SUPERFAMILY Translation proteins SH3-like domain 68 128 IPR008991 -
Tsu07g02600 247 SUPERFAMILY Nucleic acid-binding proteins 205 245 IPR012340 -
Tsu07g02600 247 Pfam Elongation factor P, C-terminal 205 244 IPR015365 GO:0005737|GO:0043043
Tsu07g02600 247 CDD S1_EF-P_repeat_1 132 192 IPR001059 GO:0003746|GO:0006414
Tsu07g02600 247 Pfam Elongation factor P (EF-P) OB domain 137 187 IPR001059 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02600 Tsu-Chr7 30076177 30082383 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02600 - - cam:101506432 385.956