Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02572 ATGGTTTCCAACAAAAGGATAACTGCATTATTACTTCTACTGTTGGCTAGTTTTGCAAGCTCAGATTTAACAAAAGACAGAGATGAATGTGCTGATAAACTTGTTACACTTGCTAGTTGTCTTCCTTATGTTGGTGGTGATGCTAATACACCTGCTATAGATTGCTGCACTGCACTTAAAATAGTCCTTGATAAGACCAAGAAATGCATCTGCATCCTCATCAAAGATCGCAATGATCCAAAACTTGGCTTCACTTTGAATGCTACTCTTGCTGTCCAGCTTCCAAATGCTTGTCACATACCATCTAATATATCTCAATGTGTAGATCTTTTGCATTTGTCACCTAAATCACCTGATGCTAAGATATTTGAAGGACTTGGAAATTCTACCAAAACAAACAGTTCCACACCAGTTTCCAGTGGTTCTGTTGAGAAGGGACCAAACTCAAGTTCTGAGGAAAAAAGTGGTGGTGGGTTGAGAAAGAGGTGGTTGGAGACAGAAGTGGTTTGTGctattttaccatttgttttCATATCACACTTTTTCATCCTAGCTTGA 558 0.3799 MVSNKRITALLLLLLASFASSDLTKDRDECADKLVTLASCLPYVGGDANTPAIDCCTALKIVLDKTKKCICILIKDRNDPKLGFTLNATLAVQLPNACHIPSNISQCVDLLHLSPKSPDAKIFEGLGNSTKTNSSTPVSSGSVEKGPNSSSEEKSGGGLRKRWLETEVVCAILPFVFISHFFILA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02572 185 SMART aai_6 30 107 IPR016140 -
Tsu07g02572 185 MobiDBLite consensus disorder prediction 126 154 - -
Tsu07g02572 185 PANTHER PROTEASE INHIBITOR/SEED STORAGE/LTP FAMILY PROTEIN 8 183 - -
Tsu07g02572 185 MobiDBLite consensus disorder prediction 124 157 - -
Tsu07g02572 185 Gene3D - 27 111 IPR036312 -
Tsu07g02572 185 Pfam Probable lipid transfer 21 107 IPR016140 -
Tsu07g02572 185 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 8 183 IPR043325 -
Tsu07g02572 185 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 108 IPR036312 -
Tsu07g02572 185 CDD AAI_LTSS 37 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02572 Tsu-Chr7 29715265 29716242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02572 7 173 Acyl Lipid Metabolism Gene Families AT1G55260 43.787 3.65e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02572 - - pvu:PHAVU_001G268300g 236.884