Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02561 ATGGGTTTGGTTTTGTTGTCTCCTCCTATTATTACATTGTTTCTGTTGTTATCAATACTAAGTTCAATCATTGTTGATGCTGGTGTTCCAATTCCAACCACTCTTGATGGACCCTTTAAGCCTGTGACAATTCCTCTTGACAAAAGTTTCCGTGGAAATGCTGTTGACTTGCCAGATACAGATCCTCTTGTTCAAAGATATGTTGAAGGTTTTCAACCTGAACAaatctctctctccctctctacATCTCATAACTCTGTTTGGATTTCTTGGATTACAGGGGAGTTTCAAATTGGGGACAATATAGAACCATTAGATCCTGAAACAGTTGGTAGCATAGTTCAATATGGAAGGTTCGGAAGGTCAATCAACCGGCAAGCTGTGGGTTATTCCCTTGTGTATAGTCAGCTATATCCTTTTGAAGGACTTCAGAACTACACTTCTGGAATTATACATCATGTTCGTCTCACAGGATTAAGAGCCAACACACTATATCAATATCAATGTGGAGATCCATCTTTATCAGCAATGAGTGATGTTCATTATTTCAGGACAATGCCAGTTTCAGGCCCAAAGAGCTACCCTAGCAGAATTGCAGTGGTTGGAGACTTAGGTCTTACTTACAATACCACATCCACTGTCAATCATATGACAAGCAACCATCCTGATCTTATTCTATTGGTTGGTGATGCTAGTTATGCTAACATGTATCTTACTAATGGTACTGGTTCAGATTGCTACTCTTGCTCATTTTCTAATACTCCCATCCACGAAACATATCAACCGCGTTGGGATTATTGGGGAAGGTACATGCAACCTCTGATATCTAGTGTCCCTATAATGGTAATAGAAGGGAATCATGAGATAGAATCCCAAGCCAAGAACAAAACATTTGTTGCTTATAGTTCTCGATTTGCATTTCCGTCAGAAGAGAGTGGATCATCATCCActttttattattctttcaaTGCTGGAGGGATACATTTTATAATGCTTGGAGCCTATATATCGTACGACAAGTCAGGGGACCAGTACAAATGGTTGGAGAAGGATTTGGCTTCTCTTGACAGGGAAGTAACTCCATGGTTGGTAGCTACATGGCATGCACCTTGGTACAGCACTTACAAGGCACATTATAGAGAAGCAGAATGTATGAGGGTGGAGATGGAAGAATTACTATATAAATATGGTGTTGATATTGTCTTCAATGGACATGTTCATGCCTATGAGAGATCAAACCGAGTATATAACTACACATTAGATCCCTGCGGTCCTGTTTATATCACGGTTGGTGACGGTGGTAACCGAGAAAAGATGGCAATTACACATGCTGATGAACCTGGAAACTGTCCAGAACCATCAACTACACCAGATAGCTTTATGGGCGGCTTCTGCGCTTTCAATTTTATATCCGGTCCAGCAGCAGGTAAGTTCTGTTGGGACCAACAGCCTGATTATAGCGCTTTCCGCGAAAGTAGCTTCGGTCATGGAATTCTAGAGGTGAAGAATGAAACTCATGCTTTATGGATTTGGCACCGCAATCAAGACTATTATGGTAACACTGGTGATGAGATTTACATTGTTAGGCAGCCTGATAAGTGTCCAGTCAAGCCAGAGGGGGTACATAAAACATGA 1635 0.4018 MGLVLLSPPIITLFLLLSILSSIIVDAGVPIPTTLDGPFKPVTIPLDKSFRGNAVDLPDTDPLVQRYVEGFQPEQISLSLSTSHNSVWISWITGEFQIGDNIEPLDPETVGSIVQYGRFGRSINRQAVGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLRANTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDASYANMYLTNGTGSDCYSCSFSNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIESQAKNKTFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLEKDLASLDREVTPWLVATWHAPWYSTYKAHYREAECMRVEMEELLYKYGVDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGNCPEPSTTPDSFMGGFCAFNFISGPAAGKFCWDQQPDYSAFRESSFGHGILEVKNETHALWIWHRNQDYYGNTGDEIYIVRQPDKCPVKPEGVHKT 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02561 544 CDD MPP_PAPs 192 529 IPR041792 -
Tsu07g02561 544 SUPERFAMILY Metallo-dependent phosphatases 197 518 IPR029052 -
Tsu07g02561 544 PANTHER PURPLE ACID PHOSPHATASE 13 16 538 - -
Tsu07g02561 544 Pfam Purple acid Phosphatase, N-terminal domain 73 185 IPR015914 GO:0003993|GO:0046872
Tsu07g02561 544 Pfam Calcineurin-like phosphoesterase 197 409 IPR004843 GO:0016787
Tsu07g02561 544 Gene3D - 72 188 - -
Tsu07g02561 544 PANTHER ACID PHOSPHATASE RELATED 16 538 IPR039331 GO:0003993
Tsu07g02561 544 Gene3D - 466 537 IPR029052 -
Tsu07g02561 544 Gene3D - 192 465 IPR029052 -
Tsu07g02561 544 Pfam Iron/zinc purple acid phosphatase-like protein C 424 516 IPR025733 -
Tsu07g02561 544 SUPERFAMILY Purple acid phosphatase, N-terminal domain 51 187 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02561 Tsu-Chr7 29584513 29588131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02561 72 435 Miscellaneous Gene Families AT2G03450 25.952 1.53e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02561 K22390 - gmx:100784006 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02561 07 29584513 29588131 Tsu07g02561 07 29584513 29588131 ECH