Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02543 ATGGCTTCTCCACCAGACACAAGCAAAACCATAAAACTTGAACGTTACAACAGTTACATCAGAAAAGTTAACAGCACAAAACTCCTTAACGCTTCTTCAAAACTTCTCTTCCGCGCCACACTTTTAATCGCTCTCGTTGTCGTTTTCTTCTTCACTTTCAATTATCCACCACTCTCCGACACCACCAACCACCACTTCCACACCCATTCCCACTTCCTCACCTCCGCATTCGGCGGCGGAGGAGCATGGGAACGTCAAATCCGTCACTCCGCAACTCCTCGCCGTCCTAACGGTTTCACTGTACTTGTCACCGGCGCAGCTGGTTTCGTCGGTTCTCACTGTTCCCTCGCTCTTAAAAAACGCGGCGACGGCGTTTTAGGTCTTGATAATTTCAATAACTACTACGACCCGTCGTTGAAGCGTGCACGACAAGATCTACTATCTCAGCATCAAATCTTCATCGTCGAAGGTGACTTAAACGACGGTCCATTGTTATCGAAACTCTTCGACGTAGTTCCGATCACTCACATCCTTCATCTAGCTGCACAAGCCGGAGTTCGTTACGCAATGCAAAATCCACAATCATACATCAAATCAAACATTGCAGGTTTCGTGAACCTTCTAGAAGTTTCCAAAGCCGCGAATCCTCAACCGTCGATTGTTTGGGCTTCATCAAGCTCAGTTTATGGTCTAAACACAGAGAATCCATTCTCAGAACTTCACCGAACAGATCAACCGGCGAGTCTCTACGCCGCAACTAAAAAAGCCGGAGAAGAAATCGCACATACTTACAATCACATCTACGGTCTCTCCCTCACCGGACTCCGATTCTTCACCGTCTACGGTCCTTGGGGAAGACCAGACATGGCGTATTTCTTCTTTACAAAAGATATCCTCCACGGAAAAACGATTGATGTATATCAAACACAAGACGGAAAGGAAGTGGCGCGTGATTTCACATACATCGATGATATCGTGAAAGGATGTATCGGAGCATTAGATACGGCGGAGAAAAGTACCGGAAGTGGCGGAAAGAAAAAAGGACCGGCGCAATTGAGAATTTACAATCTCGGAAACACATCGCCGGTGCCGGTGGGGAAACTCGTATCGATTCTGGAAAATCTTCTAACAACGAAAGCGAAGAAACACGTGATTAAGATGCCACGAAACGGTGACGTACCGTATACGCATGCGAATGTTACATTGGCTAATAGAGATTTCGGGTATAAACCTGTAACGGATCTTTCAACGGGTTTGAGAAAATTCGTGAAATGGTATGTTCGGTATTATGGAATTCAGCCGAGGCTAAAAAAGGAAAATCGTATTGATAATGAACAACCCGATGATTCCGCTTGA 1356 0.458 MASPPDTSKTIKLERYNSYIRKVNSTKLLNASSKLLFRATLLIALVVVFFFTFNYPPLSDTTNHHFHTHSHFLTSAFGGGGAWERQIRHSATPRRPNGFTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNNYYDPSLKRARQDLLSQHQIFIVEGDLNDGPLLSKLFDVVPITHILHLAAQAGVRYAMQNPQSYIKSNIAGFVNLLEVSKAANPQPSIVWASSSSVYGLNTENPFSELHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKTIDVYQTQDGKEVARDFTYIDDIVKGCIGALDTAEKSTGSGGKKKGPAQLRIYNLGNTSPVPVGKLVSILENLLTTKAKKHVIKMPRNGDVPYTHANVTLANRDFGYKPVTDLSTGLRKFVKWYVRYYGIQPRLKKENRIDNEQPDDSA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02543 451 PRINTS Nucleotide sugar epimerase signature 127 143 - -
Tsu07g02543 451 PRINTS Nucleotide sugar epimerase signature 317 332 - -
Tsu07g02543 451 PRINTS Nucleotide sugar epimerase signature 352 367 - -
Tsu07g02543 451 PRINTS Nucleotide sugar epimerase signature 392 409 - -
Tsu07g02543 451 PANTHER EPIMERASE-RELATED 1 442 - -
Tsu07g02543 451 Gene3D - 278 426 - -
Tsu07g02543 451 PANTHER UDP-GLUCURONATE 4-EPIMERASE 6 1 442 - -
Tsu07g02543 451 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 94 432 IPR036291 -
Tsu07g02543 451 Pfam NAD dependent epimerase/dehydratase family 101 339 IPR001509 -
Tsu07g02543 451 Gene3D - 102 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02543 Tsu-Chr7 29234052 29236263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02543 1 451 Miscellaneous Gene Families AT3G23820 79.221 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02543 K08679 - zju:107422361 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02543 07 29234052 29236263 Tsu07g02543 07 29234052 29236263 ECH