Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02532 ATGGCATTGCTTGTTGAAACCACCACAAGCGGCCGTGAATACAAAGTTAAAGACATGTCCCAAGCCGACTTCGGCCGTCTCGAAATCGAGCTCGCCGAAGTCGAAATGCCTGGACTCATGTCTTCCAGGAAAGAATTCGGCCCTTCCCAACCCTTCAAAGGTGCCAAAATCACCGGTTCTCTTCACATGACTATCCAAACCGCCGTCCTAATTGAAACCCTAACCGCTCTCGGCGCCGAAGTCCGCTGGTGTTCCTGCAACATTTTCTCAACTCAAGACCACGCCGCTGCCGCAATTGCTCGCGACAGCGCCGCGGTTTTCGCCTGGAAAGGTGAAACTCTCCAGGAATATTGGTGGTGCTCTGAACGTGCACTTGATTGGGGTCCTTCCGGTGGACCAGATCTGAtcgttgatgatggtggtgatgTTACACTTTTGATCCATGAAGGTCTTAAAGCTGAACAAGCTTTTGAGAAGAATGGTACTTTGCCTGATCCTAAATCTACTGATAATGCCGAGATGCAGATTGTTCTTACCATTATCAGAGATGGTTTGAAAACTGATCCTAAACGTTACCACAAGATGAAAGATAGAGTTGTTGGTGTTTCTGAAGAAACTACTACTGGTGTTAAGAGACTTTATCAGATGCAAGCTAATGGAACACTTTTGTTCCCTGCTATCAATGTCAATGACTCTGTTACCAAGAGCAagTTTGACAACTTGTATGGTTGCCGTCACTCACTCCCCGACGGACTGATGAGAGCTACTGATGTCATGATTGCCGGTAAGGTTGCTGTTGTATGTGGTTACGGAGATGTTGGCAAGGGCTGTGCTGCTGCCTTGAAACAGGGTGGTGCTCGTGTGGTTGTGACTGAGATCGATCCAATCTGTGCACTTCAAGCACTCATGGAAGGTCTTCAAGTTCTAACTCTTGCAGATGTTGTCTCCGAGGCTGACATTTTCGTTACCACAACCGGTAACAAAGACATTATCATGGTCAGTGacatgaagaaaatgaaaaacaacgCCATTGTCTGCAACATTGGTCACTTCGACAATGAAATCGACATGCATGGCCTTGAGACATACCCTGGT 1095 0.4539 MALLVETTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMSSRKEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCSERALDWGPSGGPDLIVDDGGDVTLLIHEGLKAEQAFEKNGTLPDPKSTDNAEMQIVLTIIRDGLKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQGGARVVVTEIDPICALQALMEGLQVLTLADVVSEADIFVTTTGNKDIIMVSDMKKMKNNAIVCNIGHFDNEIDMHGLETYPG 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02532 365 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 240 363 IPR015878 -
Tsu07g02532 365 PANTHER ADENOSYLHOMOCYSTEINASE 1 365 - -
Tsu07g02532 365 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 240 364 IPR036291 -
Tsu07g02532 365 Pfam S-adenosyl-L-homocysteine hydrolase 13 239 IPR000043 -
Tsu07g02532 365 PANTHER ADENOSYLHOMOCYSTEINASE 1 365 IPR000043 -
Tsu07g02532 365 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 IPR020082 -
Tsu07g02532 365 Gene3D - 1 244 IPR042172 -
Tsu07g02532 365 SMART AdoHcyase_NAD_2 240 365 IPR015878 -
Tsu07g02532 365 CDD SAHH 23 363 IPR000043 -
Tsu07g02532 365 SMART AdoHcyase_2 13 365 IPR000043 -
Tsu07g02532 365 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 13 242 - -
Tsu07g02532 365 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 262 279 IPR020082 -
Tsu07g02532 365 PIRSF SAHH 2 365 IPR000043 -
Tsu07g02532 365 Gene3D - 245 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02532 Tsu-Chr7 29080478 29082493 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02532 K01251 - cpap:110807929 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02532 07 29080478 29082493 Tsu07g02532 07 29080478 29082493 ECH