Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02517 ATGTCGTCGTTTTGCTCAGTGATCTCCCAATCTTCCTTCTCCATTTCATTTCCACATTTTCCACTTCTCACCTTTCAATCTCATTCCCCTTCTTCACTTTTCCTTCGGAAGAGTGTTAATTTAGGATGCACAAGAGAATCACCAAGTATCAAGATACACTCTTCACTTACAGatttttcaGTAGATGTAGCTGTAGAAGAAAAAAAGCTAATAAAAGGGGAAACATGGTCTGTTCACAAATTTGGAGGAACATGTGTGGGAAGTTCAGTGAGAATAAATAATGTTGCAGATGTAATAATCAATGATGATTCTGAGAGAAAATTAGTGGTTGTATCTGCTATGTCAAAAGTAACAGATATGATGTATGATCTCATTCACAAAGCTCAATCTCATGATAAGTCTTATATATCTGCACTTGATGCTGTTGCCGAAAAGCATAGTTTAACTGCACATGAATTATTCGATGGAGTTGATCTTGCTACTTTCTTATCTAATTTGCATCAAGATGTTACAAATTTAAAGGCAATGCTTCAAGCTATAGATATAGctggtcATGCTACAGAATCCTTTACTGACTTAATTGTGGGACATGGGGAGTTGTGGTCTGCACAGATATTGTCTTATGTTGTTAAGAAGAAGGGGACTCCATGCAACTGGATGGACACAAGGGAAGTCCTCGTCGTGAATCCTACTCGTGCTGATCAAGTTGATCCTGATTACTTGGAGACTGAACAAAGACTTAATGAATGGTATTCTCTTAATCCATCTAAGGTTATCATTGCTACTGGATTTATAGCAAGCACACCTCAAAATATTCCTACTACTCTCAAGAGAGATGGAAGTGACTTCTCTGCAGCAATTATGGGTGCTCTATTCAAGGCTCGTCAAGTTACCATTTGGACAGATGTTGATGGTGTGTATAGTGCAGATCCTAGAAAAGTTAGTGATGCTGTGATTTTGAAGACACTGTCGTATCAAGAGGCATGGGAGATGTCGTATTTTGGTGCAAATGTCTTACATCCACGCACAATTAGTCCAGTTATTCGATATGGAATACCAATTATAATCAGGAACATTTTCAACACCTCTGTTTCTGGAACAAAGATCTGCCATCCTTCTATTATTGAAAATGAAGATAGGAAGATATTAAGAAATTATGTCAAAGGCTTTACAACAATAGACAATTTGGCGCTTGTAAATGTGGAAGGaacTGGAATGGCCGGTGTTCCAGGTACTGCCAGTACTATTTTTAGCGCAGTAAAAGAGGTTGGAGCAAATGTTATAATGATATCTCAGGCTAGTAGTGAGCATTCTGTATGTTTTGCTGTGCCTGAGAAGGAAGTAAAAGCTGTATCTAAGGCGTTGCAATCTATATTTCACAGTGCTTTGTATGCTGGGCGTCTTTCTCAGGTTGCAGTCATTCCAAATTGCAGTATTTTGGCAGCTGTTGGCCAGAAAATGGCAAGCACTCCAGGAGTTAGTGCCACCCTTTTCAATGCATTGGCTAAGGCCAACATAAATATCCTTGCTATAGCACAAGGTTGTTCTGAGTACAATGTTACTGTTGTTCTTAAGCGAGAGGATTCTATAAAGGCTCTGAGGGCTGCCCATTCCAGATTTTATAACTCAGAAACCACCATAGCAATGGGCATCATTGGACCTGGATTAATTGGGAGCACATTACTTGATCAGCTAAGGGATCAGGCATCAACTTTGAAAGAAGAATCAAACATTGATTTGCGTGTAATGGGCATCATGGGTTCAAAGTTGATGCTCCTTGATGATTCggGCATCGACTTAGTAAAGTGGAGAGAAATTCGAGAAGAAAAAGGTGAAGTGGCTGACTTGGAAAAATTTGTTCAACATGTGCATGGAAATCATTTTATACCAAACACGGTTTTAGTGGACTGCACTGCTGATTCCGTCATAGCAAGCAATTACGATGACTGGCTGCGCAAAGGAATACATGTTATCACCCCCAATAAAAAGGCCAATTCAGGACCACTTAATGAGTATTTAAGGTTAAGAGCTCTTCAGAGGCAATCATACACACATTACTTCTATGAAGCTACTGTTGGAGCTGGTCTTCCAATTATTGGCACTTTACGAGGCCTTCTTGAAACTGGTGACAAAATATTGCAAATTGAAGGCATCTTCAGTGGGACTTTGAGTTACATCTTTAATAACTTCAAAGATGGACGGCTTTTTAGTGAGGTAGTTGCTGAAGCAAAGGAAGCAGGTTATACTGAACCAGATCCGAGGGATGATCTGTCCGGAACAGATGTTGCAAGAAAGGTGATAATTCTTGCAAGGGAATCTGGCTTAAAGCTAGAGCTTTCTGATATTCCCATTGAAAATCTTGTGCCGGAACAATTAAGAGTTAGTGCATCAGCTCAAGAGTTTATGCAGAAATTACCAAAATTTGACCAGGAGTTTATGCAGAAACAAGAAGATGCTGACAATGCAGGGGAAGTCTTGAGATACGTGGGAGTGGTAGACGTGATTAATCAAAAGGGATCGGTAGAGCTTCGACGATACAAAAAGGATCATCCATTTGCACAATTATCCGGCTCGGATAACATTATTGCATTCACAACAAGAAGGTATAGATATCAGCCTCTTATAGTTCGTGGACCAGGAGCTGGTGCACAAGTCACAGCTGGTGGAATATTCAGTGACATTTTACGACTTGCATCATATCTTGGTGCTCCATCTTAG 2718 0.3962 MSSFCSVISQSSFSISFPHFPLLTFQSHSPSSLFLRKSVNLGCTRESPSIKIHSSLTDFSVDVAVEEKKLIKGETWSVHKFGGTCVGSSVRINNVADVIINDDSERKLVVVSAMSKVTDMMYDLIHKAQSHDKSYISALDAVAEKHSLTAHELFDGVDLATFLSNLHQDVTNLKAMLQAIDIAGHATESFTDLIVGHGELWSAQILSYVVKKKGTPCNWMDTREVLVVNPTRADQVDPDYLETEQRLNEWYSLNPSKVIIATGFIASTPQNIPTTLKRDGSDFSAAIMGALFKARQVTIWTDVDGVYSADPRKVSDAVILKTLSYQEAWEMSYFGANVLHPRTISPVIRYGIPIIIRNIFNTSVSGTKICHPSIIENEDRKILRNYVKGFTTIDNLALVNVEGTGMAGVPGTASTIFSAVKEVGANVIMISQASSEHSVCFAVPEKEVKAVSKALQSIFHSALYAGRLSQVAVIPNCSILAAVGQKMASTPGVSATLFNALAKANINILAIAQGCSEYNVTVVLKREDSIKALRAAHSRFYNSETTIAMGIIGPGLIGSTLLDQLRDQASTLKEESNIDLRVMGIMGSKLMLLDDSGIDLVKWREIREEKGEVADLEKFVQHVHGNHFIPNTVLVDCTADSVIASNYDDWLRKGIHVITPNKKANSGPLNEYLRLRALQRQSYTHYFYEATVGAGLPIIGTLRGLLETGDKILQIEGIFSGTLSYIFNNFKDGRLFSEVVAEAKEAGYTEPDPRDDLSGTDVARKVIILARESGLKLELSDIPIENLVPEQLRVSASAQEFMQKLPKFDQEFMQKQEDADNAGEVLRYVGVVDVINQKGSVELRRYKKDHPFAQLSGSDNIIAFTTRRYRYQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02517 905 PANTHER ASPARTOKINASE-HOMOSERINE DEHYDROGENASE 32 905 - -
Tsu07g02517 905 ProSiteProfiles ACT domain profile. 401 470 IPR002912 -
Tsu07g02517 905 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 697 882 - -
Tsu07g02517 905 ProSitePatterns Homoserine dehydrogenase signature. 743 765 IPR019811 GO:0006520
Tsu07g02517 905 Pfam Homoserine dehydrogenase 697 895 IPR001342 GO:0006520
Tsu07g02517 905 CDD AAK_AK-HSDH 76 370 IPR041743 -
Tsu07g02517 905 PANTHER - 32 905 IPR011147 GO:0004072|GO:0004412|GO:0009067
Tsu07g02517 905 SUPERFAMILY Carbamate kinase-like 76 371 IPR036393 -
Tsu07g02517 905 SUPERFAMILY ACT-like 468 556 IPR045865 -
Tsu07g02517 905 Gene3D Dihydrodipicolinate Reductase; domain 2 708 879 - -
Tsu07g02517 905 Pfam Amino acid kinase family 77 358 IPR001048 -
Tsu07g02517 905 Gene3D - 383 544 - -
Tsu07g02517 905 CDD ACT_AKi-HSDH-ThrA-like_1 396 475 - -
Tsu07g02517 905 TIGRFAM asp_kinases: aspartate kinase 76 541 IPR001341 GO:0004072|GO:0008652
Tsu07g02517 905 Gene3D - 548 897 - -
Tsu07g02517 905 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 545 719 IPR036291 -
Tsu07g02517 905 CDD ACT_AKi-HSDH-ThrA_2 477 542 - -
Tsu07g02517 905 Pfam ACT domain 475 535 IPR027795 -
Tsu07g02517 905 Pfam Homoserine dehydrogenase, NAD binding domain 553 689 IPR005106 GO:0016491|GO:0050661
Tsu07g02517 905 Gene3D - 76 371 IPR036393 -
Tsu07g02517 905 ProSitePatterns Aspartokinase signature. 78 86 IPR018042 GO:0004072|GO:0008652
Tsu07g02517 905 ProSiteProfiles ACT domain profile. 482 559 IPR002912 -
Tsu07g02517 905 SUPERFAMILY ACT-like 386 460 IPR045865 -
Tsu07g02517 905 Pfam ACT domain 405 459 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02517 Tsu-Chr7 28854794 28862043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02517 K12524 - gmx:100812202 1432.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02517 07 28854794 28862043 Tsu07g02517 07 28854794 28862043 ECH