Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02446 ATGAAGAAACTCAAAGAAATAATAGGAAAATTGAAGGACAAGGCATCACAAAGCAAAGCTGCAATTTTCTCCAAACACAAAACTCTTTCTCTCCTTCGCGCCACAACCCACGATTCTTTCACCCCACCAAAACACAAACACATCTCCACCCTTCTTTCCTCTGGAGACGGTTCACGTGCTACCGCATCTAGTGCGGTAGAGCTTCTCATGGACCGTCTCCAAACAACTCACAATTCAGCAGTAGCTCTCAAATGCTTGATCGCGGTTCACAATATTATCAATCACGGTACATTCATTCTCCGTGATCAGCTCTCCGTTTACCCTTACACTGGTGGAAGAAACTACCTCAATCTCTCTAACTTCCGAGATAAAACAAATCATGTTTCTTGGGAGCTCTCTTCTTGGGTTCGGTGGTATGCGCAATACATCGAACACCTTATGTGCGCTTCAAGAATCTTAGGTTTCTTCATCGGAGAAACCACGCCGTTTTGTAAACCACAAGAAGAAAGAGTTTTGGGTGTTACTAATAATGATCTGTTGAGAGAAATGGATTCTTTGGTAGCGTTGATGGAAGAAATTGGTAAAAGACCCAATACTCCAACAAGTGAAAATAACAAAGTGGTTGTTGAGATAATGGATTTGGTGGAAGATGATGGAGTTGTTGTTGTGACTGAAATTTTGGTTAGAGTTAATGAATTTGTGGAGAGGGAGAGATTGGGTTGTCTTGGTTTTGGAGAAATTGTGGAATTGGTTTATGTTTTGAAGAGATTAGAAATGTGCAGAGAGAgaatgatgatggtgatggagGTGGTTGAGGAGAAGAGATTTTGGGATTCAGTGAgagaattgaaggaaaaaattgGGAAGACGAAGGTGTATCGGGAAGAAACGAAGGTTTTCCGGAAGACAACAAAAGATAGAAGAACTGAGTCTGATAGGTTTGATGATAGAGTTCTTAATTCTGTTGGTTCTATtatgtttccttcttcaagGTTCTTGTAG 1002 0.3862 MKKLKEIIGKLKDKASQSKAAIFSKHKTLSLLRATTHDSFTPPKHKHISTLLSSGDGSRATASSAVELLMDRLQTTHNSAVALKCLIAVHNIINHGTFILRDQLSVYPYTGGRNYLNLSNFRDKTNHVSWELSSWVRWYAQYIEHLMCASRILGFFIGETTPFCKPQEERVLGVTNNDLLREMDSLVALMEEIGKRPNTPTSENNKVVVEIMDLVEDDGVVVVTEILVRVNEFVERERLGCLGFGEIVELVYVLKRLEMCRERMMMVMEVVEEKRFWDSVRELKEKIGKTKVYREETKVFRKTTKDRRTESDRFDDRVLNSVGSIMFPSSRFL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02446 333 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 333 IPR045192 GO:0048268|GO:0072583
Tsu07g02446 333 SMART enth_2 25 157 IPR013809 -
Tsu07g02446 333 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 333 - -
Tsu07g02446 333 Coils Coil 1 21 - -
Tsu07g02446 333 Gene3D - 3 156 IPR008942 -
Tsu07g02446 333 Pfam ANTH domain 31 215 IPR011417 GO:0005543
Tsu07g02446 333 SUPERFAMILY ENTH/VHS domain 30 155 IPR008942 -
Tsu07g02446 333 ProSiteProfiles ENTH domain profile. 19 157 IPR013809 -
Tsu07g02446 333 CDD ANTH_N_AP180_plant 29 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02446 Tsu-Chr7 28011088 28012089 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02446 - - gmx:100794092 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02446 07 28011088 28012089 Tsu07g02446 07 28011088 28012089 ECH