Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02402 ATGTCTCATTCTCATCTCATCAATGCCGTGGTGAACCCAATCATATTTCGTGAATACATTGGCGTGAAAGATCTCCCAGCAAGTTTAGTTGATTTTCCAGCTGAGATCATCAACGATAGCATCGAACAATTTCACTTCATTCTTGGCTTTGGTAGGGAGGATTACGAGAATGGAAAAGGCACAGGAAATTTTCATCGCACTTGGAACATTGAACGTTTCAGTGCAGCAAAAGTGGCGAAGCTCAAGAAAGAGCATAAGAATGTTAAGGTGATAATAAGCATTGGAGGCCAAGGCAAACAATATCCATTTGATCCCAAAGATGCACTAGATTTATGGGTTACCAAAGCCGAAGACTCGATCAAAGAGCTCATCCATGACTATGAGAATCACCTAAAGCAGTTTAACGATAGTGCCAACTGCCCTTGCCCTTTTGATAACATAATTGATGGTATTGATATTAACTATGAGTACATCAATACCGATAAGGATACATTTTCTACCTACATAGGGAGTCTCATACAAAAACTCAAGAAGGATTGCGATCTTTCAAAATCCTTGAATGTGGTGTCCATTGCTCCAAATGAGCATGTCCAAACCCAATACCGTCAATTGTATTTGGACTACAAAAGTCATATTGACTGGATTAACTACAAGTTTTACGATCAGGCTCTGCCTACAGCTGATGAATTTGTCACTCTCTATTCTAATTTGGTCATTGATTACGGCACTCGCGCTAAACTATTGGCTGGAGTCAGCACTGATCCAGAAATTCCAAACACTAAGATTAATCGAGATGCTTTTGTTGCCGGCTGCAAATCCCTCATTGGCGAAAAATCACTCCCTGGCATTTTTGTTTGGAATGCTAATAACTCTGCCTCTCCCAACATAATTGACCCTAATCCTTACCTACTTGAAAGAGTCCTGCAAAACCTCTTTGCTGCTGAATGA 948 0.404 MSHSHLINAVVNPIIFREYIGVKDLPASLVDFPAEIINDSIEQFHFILGFGREDYENGKGTGNFHRTWNIERFSAAKVAKLKKEHKNVKVIISIGGQGKQYPFDPKDALDLWVTKAEDSIKELIHDYENHLKQFNDSANCPCPFDNIIDGIDINYEYINTDKDTFSTYIGSLIQKLKKDCDLSKSLNVVSIAPNEHVQTQYRQLYLDYKSHIDWINYKFYDQALPTADEFVTLYSNLVIDYGTRAKLLAGVSTDPEIPNTKINRDAFVAGCKSLIGEKSLPGIFVWNANNSASPNIIDPNPYLLERVLQNLFAAE 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02402 315 SUPERFAMILY (Trans)glycosidases 43 311 IPR017853 -
Tsu07g02402 315 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 148 156 IPR001579 GO:0004553|GO:0005975
Tsu07g02402 315 Gene3D Glycosidases 13 315 - -
Tsu07g02402 315 PANTHER CHITINASE 2-LIKE 11 314 - -
Tsu07g02402 315 PANTHER CHITINASE 2 11 314 - -
Tsu07g02402 315 PRINTS 2-S globulin family signature 13 26 IPR000677 -
Tsu07g02402 315 PRINTS 2-S globulin family signature 36 55 IPR000677 -
Tsu07g02402 315 PRINTS 2-S globulin family signature 78 96 IPR000677 -
Tsu07g02402 315 PRINTS 2-S globulin family signature 269 288 IPR000677 -
Tsu07g02402 315 Pfam Glycosyl hydrolases family 18 46 225 IPR001223 GO:0005975
Tsu07g02402 315 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 14 315 IPR001223 GO:0005975
Tsu07g02402 315 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02402 Tsu-Chr7 27402826 27403773 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02402 - - mtr:MTR_0443s0040 312.383