Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02357 ATGTTGGGTGGTTCACTCTCATCTCCAACAACTCAATGTCTTAagacaagaacaacaacaattgCAATGCTTTATCCATCTCATAGATTATTGTCCACACATTTTTGTCTCTTTAAGAATCTTATATCAGGTACTAGAAGATTTTCTTCAAGTGAAAGTTGTTTTCTCAGAGGAcatcaaattaatattaagCAATTTTTTGGGCTTATCTCTCATAGAGCTCCAAGAAACAAAGCAGGATTTGTTGTTTCTCCAAGATGTGTCCTGCCACTGACAGAGGAAAATGTCGAGAGGGTTTTGGACGAGGTAAGGCCGGGTTTGATGGCTGATGGAGGGAATGTGGCATTGCATGAGATAGATGGTCTTGTTGTTATCCTCAAACTACAAGGAGCATGTGGATCATGTCCTAGCTCAACCATGACATTAAAAATGGGGATCGAAACTCGCCTTCGGGATAAGATTCCGGAAATCTTGGAAGTAGAGCAAATACTAGATACTGAGACCGGTCTTGAGTTAAACGAAGAAAATGTTGAAAGTATTCTTTCGGAAATTAGACCATATCTTATTGGCACAGGAGGAGGAACATTAGAGCTTGTTGAGATTAATGATTACATTGTTCAAGTTCGGTTAAGTGGACCAGCAGCAGGAGTTATGACGGTTCGCGTTGCCTTAACGCAGAAACTGAGAGACAAGATACCTTCTATTGCTGCTGTGCAGTTAATAGAATGA 729 0.3868 MLGGSLSSPTTQCLKTRTTTIAMLYPSHRLLSTHFCLFKNLISGTRRFSSSESCFLRGHQINIKQFFGLISHRAPRNKAGFVVSPRCVLPLTEENVERVLDEVRPGLMADGGNVALHEIDGLVVILKLQGACGSCPSSTMTLKMGIETRLRDKIPEILEVEQILDTETGLELNEENVESILSEIRPYLIGTGGGTLELVEINDYIVQVRLSGPAAGVMTVRVALTQKLRDKIPSIAAVQLIE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02357 242 PANTHER NIFU-LIKE PROTEIN 3, CHLOROPLASTIC 11 242 - -
Tsu07g02357 242 Gene3D - 171 242 IPR034904 -
Tsu07g02357 242 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 171 241 IPR034904 -
Tsu07g02357 242 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 93 167 IPR034904 -
Tsu07g02357 242 Pfam NifU-like domain 96 161 IPR001075 GO:0005506|GO:0016226|GO:0051536
Tsu07g02357 242 Pfam NifU-like domain 177 239 IPR001075 GO:0005506|GO:0016226|GO:0051536
Tsu07g02357 242 Gene3D - 88 170 IPR034904 -
Tsu07g02357 242 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 11 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02357 Tsu-Chr7 26942467 26944833 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02357 - - gmx:100806364 380.948