Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02348 ATGAAGAAGCGTCAACATACTCCTCTTACTATTGCTTCTAACTTGAAAAGGAAAAGGAATGAAGCTAAAGgtaagaaaaataagaaagaaagtCGAAGGAAGGAGAAAGAAACAGAGATAAAAGTTGACATCATTCAACCTGAGAGTTCCTTGGAGGATGACCATGATGAAGAAGAGTTTGACGATGATTCTCCTAGAAGCAATGTTGTGGGAAGCTTGCAGCAAGATCCTGATGACAATGATTCTGGATCAATAGATGGTTCTGAGACTGAAGAGGACATTGATTTTTCTCATTCAGATGAAGAGGATATTAGGACAACTGGTGGAGTAAAATCTGAGGATTCAGTGGATTTAAGCTCTTTTGATTTACATCTGCAACATAATTTatcaaaagaagaaattgacaacctgaaGGACTTGAAATTCAGCTGGGATGTACCAGTTATTGGTGTCTCAAATTGCAAGTGGACAGGAACTGGAGAAAATATCTTGGAGGATTTTAATATCAACTCCTGTCCTGGTCTGAAGGAAAAGTTATATGAGCATTGGATGGATGTCTCCAAAACATCTGGAGGCAAGGATATTAATTCACCAAAGCAGCAGATGTTTTTCTCCATTTGTAACAGCTACCGGGATATACTTCATTGCAACAAGAGACCATTTTATCTAAAAGGCCATGAAGACACAAGTGTCATGGATGCATACATAATGCATTCTCTCAATCACGTCTTCAAAACTAGAGATTGTGTTAAAAAGAATGATGTCAAACTGGCTAAGCTTGAAGAGGGTGCGGATAGTGAGAGATTCCGAGATCAAGGTTTTACTCGTCCCAAGGTTTTAATTTTGTTGCCATTGGCAAGTATTGCGTACCGTGTTGTAAAGAGGCTTATACAACTTACACCTTCAGCTTATAAGGTCAATGTTGAACATATGGATCGTTTTTCTGATAAATTTGGAGGTGAAGATCATAAGGGTGACAAGGATGGCCAGGAGTCTGAAGATGCATACCCTCAGAAGTCATCCAAACCGGATGACTTTGAACTACTTTTTGGAGGCAATAATGAGGACGACTTTATGATTGGCATAAAATTTACTAGAAAGGCCATCAAGTTGTTCAGTGATTTCCATACCTCAGACTTTATTATTGCTTCACCACTTTGTTTGGCTAATAAAATTGAAGAGGTTGGAAGCAATACGGAAAAAGATTTAGATTTTCTTTCGTCCATAGAGGTTCTGATTATTGATCATGCAGATGTAATAGCAATGcagAACTGGGATCATGTGCATACAGTTATTGAACACTTGAACCGCTTACCGTCTAAGCAGCCCAGAACAGATGTTATGCGCATTAGACCATGGTATCTTGATGAGCAAGCCAGATTTTATAGGCAAACTATAATTCTAGGGTTTTATTCGAATCCAGGTGATGAAAATTCCTTCTTGTAG 1446 0.3734 MKKRQHTPLTIASNLKRKRNEAKGKKNKKESRRKEKETEIKVDIIQPESSLEDDHDEEEFDDDSPRSNVVGSLQQDPDDNDSGSIDGSETEEDIDFSHSDEEDIRTTGGVKSEDSVDLSSFDLHLQHNLSKEEIDNLKDLKFSWDVPVIGVSNCKWTGTGENILEDFNINSCPGLKEKLYEHWMDVSKTSGGKDINSPKQQMFFSICNSYRDILHCNKRPFYLKGHEDTSVMDAYIMHSLNHVFKTRDCVKKNDVKLAKLEEGADSERFRDQGFTRPKVLILLPLASIAYRVVKRLIQLTPSAYKVNVEHMDRFSDKFGGEDHKGDKDGQESEDAYPQKSSKPDDFELLFGGNNEDDFMIGIKFTRKAIKLFSDFHTSDFIIASPLCLANKIEEVGSNTEKDLDFLSSIEVLIIDHADVIAMQNWDHVHTVIEHLNRLPSKQPRTDVMRIRPWYLDEQARFYRQTIILGFYSNPGDENSFL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02348 481 MobiDBLite consensus disorder prediction 82 98 - -
Tsu07g02348 481 MobiDBLite consensus disorder prediction 31 49 - -
Tsu07g02348 481 MobiDBLite consensus disorder prediction 317 344 - -
Tsu07g02348 481 MobiDBLite consensus disorder prediction 67 81 - -
Tsu07g02348 481 Coils Coil 12 39 - -
Tsu07g02348 481 Gene3D - 234 450 IPR027417 -
Tsu07g02348 481 MobiDBLite consensus disorder prediction 1 114 - -
Tsu07g02348 481 MobiDBLite consensus disorder prediction 317 341 - -
Tsu07g02348 481 Pfam Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 198 474 IPR010678 GO:0005730|GO:0006364|GO:0034511
Tsu07g02348 481 PANTHER ORF PROTEIN-RELATED 20 474 IPR010678 GO:0005730|GO:0006364|GO:0034511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02348 Tsu-Chr7 26779895 26787936 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02348 K14774 - gmx:100810500 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02348 07 26779895 26787936 Tsu07g02348 07 26779895 26787936 ECH