LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu07g02332	ATGGGCTGCGGGGGCTCCAAAGTGGAGGAGTTCCCCGTGGTAACTCTCTGCAGACAGCGTAAACAGTTTCTCAAAAACGCCTCCGACCAACGCTATGCTCTCGCCGCCGCACACGTTGCTTATTTACAGTCGCTAAGAGATATCGGAGAAGCTCTTCGAAAATTCTCCGATCAAGATCTCTTCCTTTCAACTACTTCAActccttcttcttcattttcttcccCTGTTCTCACATTGCCTTCACACGAAGGTAAATCCAAAAACAGTAGTAACCGCcacatttcatcttcttcaccttcTCATCATGATGATGACGACGACGATGATGATTCTCATTTGCATCTTTCTTCTGGATCGGACTTAAGTTCTCCTTCTTCAGATCATGTTCATGATCaccatcataatcatcaaacaCCGGAACCTGAATCCGGACCTGAACGAGAATTTGAATATCATCAACGCGAACCTGAACCCGAACCATCATCTTACGGGTATAACTATCCATATCCCTATTCTTATTCAGAAAATTGGAATCAAAATCAACCAGTTAATAGTAATTGgaatcaaaaccaaaatcaaccAGGGGTTAATAGTTATGCATATTATATGAAGAAATCTGCACCTCATGGAAAACCTATGATTTATCAAGAACCAGAGAGACACGTGGCAGCATCTGGACAATGGACGGGTTCTCCTTACGGTTATGGTGGTTATGGTTATCCTGATGTGAATGGGAATGCTGGTGGTTTTTATGGTTTTCCGGCTGGACCTTCGTCTTCTTCTCCGCCACCTCCTCCGGTTGCTCCCAGTCCACCTTCGCCGCCGAGAGTTTCTACTTGGGATTTCCTTAACTTTTTTGAGACTGTTGACAATGGTTATTCTGGCTATGGAAATTATGGATTAGGGTTAGTGTCGAGTGGGAGTAGCCCTGATTCGAAAGAGGTTAGGGAGAGGGAAGGGATTCCTGAACTAGAAGATGAAACTGAACAGGAAACAACAGTGAAGGAGATTCATCgcgagaagaagaaaaaagtggcGGAGAAAgtggaaaaggaaaaggaaaaagaaaagaaaaaggaagaggTTATTGTTGGTGGTGGTAGAGATTTTGGAGAAGGAACTTCGAATTCGAAGGAAGTGCCATTGCAACAAGTGAGTAGTAGTGAAGGAAGTTCCAAAACGGTGCGTTTTCATAGTAGCAACGATAGCGGTAGTTCGATTTCTTCTCATGAAAAAAAGAGTCATGATAGTGTTGTTTCTAGAGGATCACCTAGAAAGAAAGGGGTGAGTTTTGAAATTGATGCTGATGAAGAAGCTGCTACTGTTACCACTGTGGAGATTGATGGTGAATCTTCTATTTTAAGTAGCTTAACCACTATGTCTCCACATGGAACTAGAGACCTCAAAGAGGTTGTTAAGGAAATTAGAGATGAGTTTGAGACTGCTTCGAATCATGGTAAAGAGGTCGCATTTCTTCTTGAGGTTTATAAAGCACCTTATCGGTCAAGGCTTGCTGCATTTAGAGCTATCTTTTCGAGGATATTGGATTCCAGTCCGCCTTCGGATCCTCCATCTGGGCCGCCAATCCAATTCTCTTCTAGGACAATGAAATTGGCAAAAGCATACTGTGGGGAACCTGAGAAAGATTTAATATCAAATCCGATAAACCTTTCATCTACGTTAGAGAAACTTTATGCATGGGAAAAGAAGTTGTACAAGGAAGTTAAGGATGAAGAGAGGTTAAGAGCTATATATGAGAAACAATGTAAGAGACTGAAAGCATTGGATGATCGAGGAGCTGAAGCTACTAAAATTGATGCTGCTGAGGCATCGATTAGAAAGTTGCTgacaaaaataaacatttgCATCAGAAGTGTTGAAACTATATCAGGGAGGATACACAAATTGAGGGATGAAGAATTGCAGCCTCAGCTAGCAGCATTAATTAATGGATTAATAAGAATGTGGAAATTCATGCTTCAATGCCACCAGAAACAATTCCAGGCTATCATGGAGAGTAAAACTCAATATCTCAAGTTAAACGCTGGTTTGCAAAGAGAAGAAAGTTTGAAAGTAATTATAGAACTCGAAAGGGAGCTTCTGAATTGGTGCACTCAGTTCAACAATTGGGTTAGGACTCAAAAATCTTATGTTGAAAATTTGAATGGGTGGCTCATACGGTGCCTTCTTAACGAACCTGAAGAAACAGCCGATGGTGTTGTCCCTTTCTCTCCAGGCCGGATTGGAGCTCCACCTGCTTTCATAATCTGCAATGATTGGAATCAAGCAATGAATAGAATTTCAGAAAGAGGGGTGGTGGATGCTATGGGAAAATTTGCTCAAAAACTACATGAGTTATGGGAGAGACAAGATGAGGAACAAAGGCGGAAAATCAGGGCAGAGTATCTCTCAAAGGATTTTGAGAAACAACTTAGAGCTATGCGCACCGAAATGGGAAGCTCAAAACACGAGCATGACAAAGTTTCAGGGAAGAGTGCGTTGTCGAAGTTTAATTCTGATAGTGGTGTCTCACCGCTGGATGATCTAAAGGTTGATTTAGATTCTATGAAGAAGAGATTGCATGAAGAGAGGGCAAGACATAAAGAAGCCGTCAAACTTGTACGCGATGCAGCTTCTAATAGTTTACAGACTGGTTTGATTCCCATTTTTAAGACATTAGAAAGTTTCACATCGGAGGTGGTGAAAGCGCACGAGCAAGTTAGAATTCAAAATGACGGGGCCACGTAG	2748	0.3963	MGCGGSKVEEFPVVTLCRQRKQFLKNASDQRYALAAAHVAYLQSLRDIGEALRKFSDQDLFLSTTSTPSSSFSSPVLTLPSHEGKSKNSSNRHISSSSPSHHDDDDDDDDSHLHLSSGSDLSSPSSDHVHDHHHNHQTPEPESGPEREFEYHQREPEPEPSSYGYNYPYPYSYSENWNQNQPVNSNWNQNQNQPGVNSYAYYMKKSAPHGKPMIYQEPERHVAASGQWTGSPYGYGGYGYPDVNGNAGGFYGFPAGPSSSSPPPPPVAPSPPSPPRVSTWDFLNFFETVDNGYSGYGNYGLGLVSSGSSPDSKEVREREGIPELEDETEQETTVKEIHREKKKKVAEKVEKEKEKEKKKEEVIVGGGRDFGEGTSNSKEVPLQQVSSSEGSSKTVRFHSSNDSGSSISSHEKKSHDSVVSRGSPRKKGVSFEIDADEEAATVTTVEIDGESSILSSLTTMSPHGTRDLKEVVKEIRDEFETASNHGKEVAFLLEVYKAPYRSRLAAFRAIFSRILDSSPPSDPPSGPPIQFSSRTMKLAKAYCGEPEKDLISNPINLSSTLEKLYAWEKKLYKEVKDEERLRAIYEKQCKRLKALDDRGAEATKIDAAEASIRKLLTKINICIRSVETISGRIHKLRDEELQPQLAALINGLIRMWKFMLQCHQKQFQAIMESKTQYLKLNAGLQREESLKVIIELERELLNWCTQFNNWVRTQKSYVENLNGWLIRCLLNEPEETADGVVPFSPGRIGAPPAFIICNDWNQAMNRISERGVVDAMGKFAQKLHELWERQDEEQRRKIRAEYLSKDFEKQLRAMRTEMGSSKHEHDKVSGKSALSKFNSDSGVSPLDDLKVDLDSMKKRLHEERARHKEAVKLVRDAASNSLQTGLIPIFKTLESFTSEVVKAHEQVRIQNDGAT	915

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	305	432	-	-
	Tsu07g02332	915	Coils	Coil	846	866	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	817	831	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	817	836	-	-
	Tsu07g02332	915	Pfam	Protein of unknown function (DUF630)	1	58	IPR006868	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	254	275	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	64	167	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	257	275	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	125	157	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	376	407	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	64	96	-	-
	Tsu07g02332	915	Coils	Coil	334	362	-	-
	Tsu07g02332	915	Pfam	Protein of unknown function (DUF632)	468	784	IPR006867	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	97	115	-	-
	Tsu07g02332	915	Coils	Coil	575	595	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	408	432	-	-
	Tsu07g02332	915	MobiDBLite	consensus disorder prediction	331	366	-	-
	Tsu07g02332	915	PANTHER	FAMILY PROTEIN, PUTATIVE (DUF630 AND DUF632)-RELATED	1	911	-	-
	Tsu07g02332	915	PANTHER	UNCHARACTERIZED	1	911	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu07g02332	Tsu-Chr7	26413911	26418745	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu07g02332	466	800	Acyl Lipid Metabolism Gene Families	AT2G27090	31.319	3.53e-45	172

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu07g02332	-		-	aprc:113852495	1037.71