Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02327 ATGTTTGCATGTATATTGTGGAGCATTTGGAAGCAACGAAATAATCAGATTTGGAACAATGTAACTGATGCCCAAAATTTTGTATTGTCCCGTGCTGTTAATATGTTGCAGGAATGGAAAGCAGTCCGTATTGTTGCATCCAATCCAGATTCTAAAACTCAGGAGCCTTCAGCGAGGAAGTGGCGTAAACCGATGGCTGGTCGTGTGAAATGCAATATAGATGCTTCCTTCCCGGCTAATTCTGACAGAGTTGGTATTGATATTTGTATCAGAGACGAACAAGGTGCTTTCATTTTAGCTAAGACTGAATGGCTTAATCCGAAAAGCGAGGTGCATATTGGTGAAGCACTAGGCCTGCTGTCAGCACTTGATTGGGTATATGAGCTTCAATTAGGTCCTGTTGATTTTGAGTTGGATTTTAAGAGAGTAGTTGATAGCTTTCACTCTTCAACTAAGGACTTTTCTGAATTTGGAGCTATTATGAATCATTGTAAATCGATTTTCTCCGATTATTATAGAAACTCTAGTGTCGAGTTTATACGAAGACAAGCAAATGAAGTTGTCCATAATCTAGCTAAGGCGGCCACATTGTCAACTAGTCACCAGATTTTGGTTGATGAACATGTTGTACATAACAAATCGGGTAAAAATATGGATGGAGATAATTCGAGCGACGATGAACAAATGACAAGTTCAAGACTAGGAATAAGATGTTGTTTAGGTAGGCCTAGAAGTGTAGGAAATTCACGTTCCTATTCGACGCCTTCTACGTCAAGAAACAGCACAACCAATATAAAAAGGACGGATCATGCCAGAAGCAAGAGCATGGaaagttttgataattttaagcCAACTCCTAGTTCATCGAACAGTAGTCGAAGCCTTAGAATGCCTCCTCATATGAGGTCAAGAAATGATAGCAGTCGTAGGAGTACTCCAATCATGTATTCTAATTCATCAGGGATGCTAAAACCCCCACCAATAGAGAAAAATATTGAATGTACCCTTGAAGAGTTGTGTTATGGTTGCACGAAAAAGATCATGATCACAAGAGACGTCCTCACAGATAAAGGGGGTGTAGTTCAACAGGAGGAACTACTAACAATAAATGTAAAACCAGGATGGACAAAAGGAACAAAGATTAAATGTGTAGGAAAAGGAAATGAGAGGCCTAATGCATACTCAGAAGacctaatattttatatatctgAGAAAAGACACCTATTATTTACAAGAGAAGGAGTTGatttagaattatgtgtagaaATTACCTTACTAAAGGCACTTACTGGTTGTACAATATCAGTACCATTGTTAGGTGGAGAGCATATGAGTTTGACAGTAGATGATATTATATACCCTGGCTATCAGAAGATTATCCAGGATCAAGGTATGCCAATCTCAAGCGCGACGGGGAAGAGAGGAAACTTGATAATTAAATTTCTTGTTGAGTTTCCGACACATTTATCAGATAATCAAAAATCTGATGTTTTTGGTATTTTACAGAATTCTTGTTATTAA 1521 0.3721 MFACILWSIWKQRNNQIWNNVTDAQNFVLSRAVNMLQEWKAVRIVASNPDSKTQEPSARKWRKPMAGRVKCNIDASFPANSDRVGIDICIRDEQGAFILAKTEWLNPKSEVHIGEALGLLSALDWVYELQLGPVDFELDFKRVVDSFHSSTKDFSEFGAIMNHCKSIFSDYYRNSSVEFIRRQANEVVHNLAKAATLSTSHQILVDEHVVHNKSGKNMDGDNSSDDEQMTSSRLGIRCCLGRPRSVGNSRSYSTPSTSRNSTTNIKRTDHARSKSMESFDNFKPTPSSSNSSRSLRMPPHMRSRNDSSRRSTPIMYSNSSGMLKPPPIEKNIECTLEELCYGCTKKIMITRDVLTDKGGVVQQEELLTINVKPGWTKGTKIKCVGKGNERPNAYSEDLIFYISEKRHLLFTREGVDLELCVEITLLKALTGCTISVPLLGGEHMSLTVDDIIYPGYQKIIQDQGMPISSATGKRGNLIIKFLVEFPTHLSDNQKSDVFGILQNSCY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02327 506 PANTHER FAMILY B PROTEIN, PUTATIVE-RELATED 198 502 - -
Tsu07g02327 506 MobiDBLite consensus disorder prediction 211 322 - -
Tsu07g02327 506 Gene3D - 324 406 - -
Tsu07g02327 506 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 198 502 - -
Tsu07g02327 506 Gene3D - 407 487 - -
Tsu07g02327 506 Gene3D - 67 202 IPR036397 GO:0003676
Tsu07g02327 506 Pfam DnaJ C terminal domain 328 486 IPR002939 -
Tsu07g02327 506 MobiDBLite consensus disorder prediction 246 264 - -
Tsu07g02327 506 MobiDBLite consensus disorder prediction 278 298 - -
Tsu07g02327 506 SUPERFAMILY HSP40/DnaJ peptide-binding domain 327 407 IPR008971 GO:0006457|GO:0051082
Tsu07g02327 506 SUPERFAMILY HSP40/DnaJ peptide-binding domain 410 495 IPR008971 GO:0006457|GO:0051082
Tsu07g02327 506 Pfam Reverse transcriptase-like 72 195 IPR002156 GO:0003676|GO:0004523
Tsu07g02327 506 CDD DnaJ_C 326 489 - -
Tsu07g02327 506 CDD RNase_H_like 71 193 IPR044730 -
Tsu07g02327 506 SUPERFAMILY Ribonuclease H-like 69 197 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02327 Tsu-Chr7 26351579 26354162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02327 5 208 Glycoside Hydrolase AT2G33160 25.854 3.96e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02327 K09519 - gmx:100782604 324.324