Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02320 ATGGCACAAACTATGTTGCTCATGTCTAGTGTCTCTAGTACTTATTCAGTGGAATTGAAGAAAGATCCTTTGCTTCAATTACAGTGCCAAAGATTGAGGTCTAGAATCTCTGATGTTTCATTCAACCCACTTTCTTCAAATTCTAAGTCTCTTTCATCTCGTACATTCACAACTCTTGCTCTTTTCAAATCAAAAACCAAAGCCCCTGCCAaggtTGTAAAGCCAAAACCAAAGGTTGAAGATGGTATCTTTGGAACTTCTGGAGGATTTGGTTTCACTAAGCAAAATGAACTTTTTGTGGGACGTGTTGCTATGATTGGTTTTGCAGCATCAATTTTGGGTGAAGCATTAACTGGCAAAGGAATTCTAGCACAATTGAATTTGGAAACTGGAATTCCAATTTATGAAGCAGAACCACTTCTCCTATTTTTCATTATCTTCACTCTTCTAGGAGCCATTGGAGCTCTTGGTGACCGTGGTaaatttgttgatgatgaacCAACTACTGGTGGTGTTATTCCTCCAGGAAAAGGCTTTAGAGCAGCTCTTGGTCTTAGAGAAGGAGGTCCTTTATTTGGATTCACCAAGTCCAATGAACTGTTTGTTGGAAGATTGGCTCAATTGGGTTTTGTTTTCTCATTGATTGGAGAAATTATTACTGGGAAGGGAGCTCTAGCTCAGCTCAACGTTGAGACCGGGGTACCAATTACTGAAATtgaaccattagtcttgttcaatgttattttcttcttcattgctGCTTTGAATCCCGGAACCGGAACATTTGTAACAGATGAAGAGGAAGATTAg 810 0.3679 MAQTMLLMSSVSSTYSVELKKDPLLQLQCQRLRSRISDVSFNPLSSNSKSLSSRTFTTLALFKSKTKAPAKVVKPKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVDDEPTTGGVIPPGKGFRAALGLREGGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNVETGVPITEIEPLVLFNVIFFFIAALNPGTGTFVTDEEED 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02320 269 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 192 254 - -
Tsu07g02320 269 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 178 - -
Tsu07g02320 269 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 192 254 - -
Tsu07g02320 269 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 178 - -
Tsu07g02320 269 Gene3D Chlorophyll a/b binding protein domain 135 239 - -
Tsu07g02320 269 Gene3D Chlorophyll a/b binding protein domain 40 134 - -
Tsu07g02320 269 SUPERFAMILY Chlorophyll a-b binding protein 62 247 - -
Tsu07g02320 269 Pfam Chlorophyll A-B binding protein 70 214 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02320 Tsu-Chr7 26304344 26306924 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02320 K03542 - gmx:100807355 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02320 07 26304344 26306924 Tsu07g02320 07 26304344 26306924 ECH