Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02304 ATGCAGGATAGAGATTTGAATGAGTACAGTCCCTCTCGTTCGTTATCCAGCAAACATTTATCTTGCAGCCATCGATTATGTGATACGGGGTCAAATTGTAAAACTAACAAGCAACAATGTCCGTACACGGTCAATTACGTATCAGATAATACATCAAGTTCTGGGCTGTTAGTTGAGGACATATTGCATCTTCAATCCAGCGATGGCAGTGGCAGCGGCAGCAAATCAAATTCTTCTGTTCAGGCTCCAGTTGTTGTTGGGTGTGGTATGAAGCAAAGCGGTGTTTATTTGGATGGTTTTGCTCCTGATGGTCTCATTGGTTTGGGACCTGGGGAGAGTTCGGTTCCGAGTTTTCTTGCTAAATCAGGATTAATCCGTGATTCTTTTTCGTTGTGCTTTAATGAAGATGATTCTGGTAGATTATTTTTTGGTGACCAGGGACCAACTGTGCAACAGTCTACTCCATTCTTGCCCTTGGATGGAATGTTTTCAACCTACATTATTGGTGTGGAGGCTTGTTGTATAGGAAGTTCTTGTCCTAAAGTAACAAGTTTTAATGCtcagtttgatagtggaacatCATTTACGCTTCTTCCTGGTCATGCATATGGAGCAATAGCCGAGGAGTTTGACAAACAAGTAAATGCTACAAGATCTACCATTCAAGGATCTCCTTGGGAGTATTGTTATGCACCCAGtTCGCAACAGCTGCCTAAGATTCCTACATTGACACTCACGTTCCAACAGGATAACAGTTTTGTGGTCTATAATCCCGTGTTTGTATTTTACAACAATCAGGGAATTGATGGATTTTGTTTGGCAATATTGCCGGCTGATGGGGATCTGGGAACAATTGGACAAAATTTCATGACGGGATACCGGTTGGTATTTGATAGGGAAAACAAGAAGCTAGCATGGTCACGCTCAAATTGTCAGGATCTCAGTCTAGGTAAGAGGATGCCCATCTCCCCTCTGAACGGGTCATCGTCAAATCCGCTTCCTGCAGATGAGCAGCAAAGAACCAAAGGGCATGCAGTTGCTCCAGCTGTTGCTGGAAGGGCTCCTCAAACACCTTCAGTTGTTTCATCTCAAATATCACGGATGGTTTCTTACCGGCAACATTGGCACTGCTATTGGTTACTTCTATTTCAACTTCTGTCAGTCTTTTACTAA 1173 0.4237 MQDRDLNEYSPSRSLSSKHLSCSHRLCDTGSNCKTNKQQCPYTVNYVSDNTSSSGLLVEDILHLQSSDGSGSGSKSNSSVQAPVVVGCGMKQSGVYLDGFAPDGLIGLGPGESSVPSFLAKSGLIRDSFSLCFNEDDSGRLFFGDQGPTVQQSTPFLPLDGMFSTYIIGVEACCIGSSCPKVTSFNAQFDSGTSFTLLPGHAYGAIAEEFDKQVNATRSTIQGSPWEYCYAPSSQQLPKIPTLTLTFQQDNSFVVYNPVFVFYNNQGIDGFCLAILPADGDLGTIGQNFMTGYRLVFDRENKKLAWSRSNCQDLSLGKRMPISPLNGSSSNPLPADEQQRTKGHAVAPAVAGRAPQTPSVVSSQISRMVSYRQHWHCYWLLLFQLLSVFY 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02304 390 Gene3D Acid Proteases 2 144 IPR021109 -
Tsu07g02304 390 Gene3D Acid Proteases 145 315 IPR021109 -
Tsu07g02304 390 MobiDBLite consensus disorder prediction 321 337 - -
Tsu07g02304 390 MobiDBLite consensus disorder prediction 321 352 - -
Tsu07g02304 390 Pfam Xylanase inhibitor C-terminal 186 307 IPR032799 -
Tsu07g02304 390 ProSiteProfiles Peptidase family A1 domain profile. 1 307 IPR033121 -
Tsu07g02304 390 PANTHER ASPARTYL PROTEASES 5 329 IPR001461 GO:0004190|GO:0006508
Tsu07g02304 390 Pfam Xylanase inhibitor N-terminal 8 145 IPR032861 -
Tsu07g02304 390 SUPERFAMILY Acid proteases 6 312 IPR021109 -
Tsu07g02304 390 PANTHER ASPARTIC PROTEINASE-LIKE PROTEIN 1 5 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02304 Tsu-Chr7 26083390 26086296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02304 8 314 Miscellaneous Gene Families AT1G44130 25.826 2.04e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02304 - - mtr:MTR_3g087780 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02304 07 26083390 26086296 Tsu07g02304 07 26083390 26086296 ECH