Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02297 ATGTTGCTTGGAAAACGTCCACGGCCACCAGTTAtgagaagaacaagaagcatgAGCGGTGGTCTATCCGTGGACGTGCAGACACCTGATAATCAGATCACCAACAACTTAGAACCACATCACGAGGAACAACAATCATCACTGATGTCTGATCATAATTCTCTGCATCCACAACCAAATCATGAAGATCCACATGCGGTTGTGATGACAGGAACAGAAACAAACGCGGAATTAACGGTGACTGATGAGTGTATAGTGGAAAGTACTGTGATGTTCCCTTCACACACAACCACAATCACTAACAATATTGTTAATCATAATAATATTCCTCTGAGTGTGAGTGTAGATGTGATACACAGTACACCTCACTTTCTCCGAACTTGTGGCCTCTGTAACTGTCGTTTGGCTCCCGGTCGAGACATCTACATGTATAGGGGAGATACGGCATTTTGCAGTTTGGAGTGTAGGGAGGAGCAAATGAAACAAGACCGTAGAAAAGAAAAGTGGAAAATGAGTCTTTCCAAGAAAGAAGACCACCGTGTATCACCACCGTGCACTGCCACCGCTAAAGCTTCCACTACTGCTTGTACTTGA 594 0.4293 MLLGKRPRPPVMRRTRSMSGGLSVDVQTPDNQITNNLEPHHEEQQSSLMSDHNSLHPQPNHEDPHAVVMTGTETNAELTVTDECIVESTVMFPSHTTTITNNIVNHNNIPLSVSVDVIHSTPHFLRTCGLCNCRLAPGRDIYMYRGDTAFCSLECREEQMKQDRRKEKWKMSLSKKEDHRVSPPCTATAKASTTACT 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02297 197 Pfam zinc-finger of the FCS-type, C2-C2 120 166 IPR007650 -
Tsu07g02297 197 ProSiteProfiles Zinc finger FLZ-type profile. 123 167 IPR007650 -
Tsu07g02297 197 PANTHER FCS-LIKE ZINC FINGER 5 1 186 - -
Tsu07g02297 197 MobiDBLite consensus disorder prediction 20 55 - -
Tsu07g02297 197 PANTHER PROTEIN INCREASED RESISTANCE TO MYZUS PERSICAE 1 1 186 - -
Tsu07g02297 197 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02297 Tsu-Chr7 26010051 26012048 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02297 - - mtr:MTR_3g087700 248.054