Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu07g02285 | ATGGCAAACCCAACTCATCTCCTCCCTCTCCTCTTTCTCCTCTCATTTTGCTTCACCGGAACCGTTACATCTGAAGGTGACTGTGTATACACGGTGTACGTTAGAACCGGATCAATCATCAAAGCAGGAACAGACTCAATCATGACCCTAACATTATACACCGCAGACGGTTACGGTATATTAATCAACAATCTTGAAGCATGGGGCGGGTTAATGGGTCCGGATTATAACTACTTCGAACGGGGCAACCTTGATATATTCAGTGGTAGAGGTCCTTGTTTAGATGGACCCATTTGTAATTTGAACTTAACTTCAGACGGGTCGGGTTCTCATCATGGTTGGTACTGTAATTATGTGGAGGTTACTTCCACTGGAGTCCACACTCCTTGTGCTCAGCATCAATTTACGGTTGAACAGTGGCTTGCTACTGACACGTCACCTTATGAGCTTACGGCTATTAGGAATGACTGTCAGTATAATTTGGGTCAGACCCGTCCCAGATTAAAGATCGTTGACGCTGTCAGATCTGAGTCTGGGACTGGGTCTGAGTCAGATTTCTCTATTTTGCGCTCTAAGGTGTATTAA | 585 | 0.4496 | MANPTHLLPLLFLLSFCFTGTVTSEGDCVYTVYVRTGSIIKAGTDSIMTLTLYTADGYGILINNLEAWGGLMGPDYNYFERGNLDIFSGRGPCLDGPICNLNLTSDGSGSHHGWYCNYVEVTSTGVHTPCAQHQFTVEQWLATDTSPYELTAIRNDCQYNLGQTRPRLKIVDAVRSESGTGSESDFSILRSKVY | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu07g02285 | 194 | Pfam | PLAT/LH2 domain | 30 | 152 | IPR001024 | GO:0005515 | |
| Tsu07g02285 | 194 | Gene3D | PLAT/LH2 domain | 19 | 147 | - | - | |
| Tsu07g02285 | 194 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 29 | 146 | IPR036392 | GO:0005515 | |
| Tsu07g02285 | 194 | CDD | PLAT_plant_stress | 28 | 156 | - | - | |
| Tsu07g02285 | 194 | ProSiteProfiles | PLAT domain profile. | 28 | 155 | IPR001024 | GO:0005515 | |
| Tsu07g02285 | 194 | PANTHER | - | 1 | 189 | - | - | |
| Tsu07g02285 | 194 | PANTHER | PLAT-PLANT-STRESS PROTEIN | 1 | 189 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu07g02285 | Tsu-Chr7 | 25818887 | 25820272 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu07g02285 | - | - | adu:107469134 | 261.536 |