Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02284 atgggAGACATTTCGCCAGAGAGAAAATCGGGTTGTGGATTGATGACAACGGTATTCGGAAGACATAGACAACGGTCAAAAAATGCATCCTCTACAGGTTCTACTCCCATACCACGTAGAGGTGCCTCTAAAGAGGTCGTTTACGATCCACCTTCACACAACGTCTCAAACACTTCAACTACTGGTTCTGTTTCCAATTCTtcttatttatcaaataataataataataataataataataataatacacaaAGAAGAAACTCCAACGAAACGGCAATGCCACGTGGAACGTCAAAGAATTCAAATTCATCAACTACACAGGGGTATGTTAATCAAGGTAGGAGGGTGCCAAAAGAAGTTGTTGGAATTTCAGGTGAGTTAGATACCATGATTAATGATCACCAAAAATCTAACTCCAAAGGAAGTACTTTTGTTCGCGCTTCGTCAGGCAATGTTATGTTGTATGGAAATTTAGGTAATCTTAGACAAGGAGCTAAAGATAATAGTTACTCAAATGCAATGGATACTTACAACCAATACTTTGAAAATGCAAACACAAATTCTAATGTTGGAGGAAACACAAAGAATGTGTCGAGTATTAATAAAGAGACAAAATCCTCGACGAAGTTGAAGGAAGGAAAATCAGGTGGTGGTTCACTTTGTAGGACTATATCAACTAGAATGGACCCAGAACAGTTGAAGATAATGGGGAATGAGGATTATAAGAATGGACAATTTGCAGAGGCGTTATCTTTGTATGATGCAGCTATCGCAATTGATCCTAAAAAGGCTGCTTATAGAAGTAATAGAAGCGCTGCTTTAACTGCTCTTGGTAGGCTTCTTGAAGCTGTGTTTGAATGTAGGGAAGCTATTCAAATTGATCCTCATTATCAAAGAGCTCATCATCGTTTAGGAAGTTTGCATTTTAGATTAGGAGAAACAGATAAGGCCCTTTATCATTATAAACAAGCAGGGCCAGAGGCTGATCCTGATGAAGTTGCTAAAGTGAAGATTCTTCAAGCTCATTTAAATAAGTGCACCGAGGCTCAAAGGGTAGGAGATTGGAACACACTCATTGTCGAGACCTCCAACACTATATCATCTGGTGCAGATTCTGCTCCACAGATATTTGCGTTGCAAGCCGAAGCCCTGCTAAAACTCCGTAGGCATCAAGATGCAGACAATGTAATGTCAAAGTGTCCTAATTTTAATGTTGACGATTGTACCAAGTTCTTTGGACCAATTTGTAATGCAAATTTGTTAGTAACACGAGCTCAAGTTGATCTAGCTGCTGGCAGATTTGATGATGCTTTGGAGGCAGCACATAAAGCAACTAGGCTAGACACTAACAACAAGTTAGCAAACAAGGTATTGGGAAAGGCTCGAGCCGTGACAGGTGCAAGATGTAGAGGAAACGAGCTTTTCAAGGCGTCAAAGTTCTCTGAGGCTTGTACTGTATATGGAGAAGGGCTTCAGTATGATCCATATAACTCAGTTTTACTATGCAACCGAGCCGCTTGTAGATCAAAACTTGGTCAATTGGAGAAAGCAGTTGAAGATTGCACTGCTGCTCTTAACTTACGCCCATCTTACACCAAAGCAAGGTTGAGAAGAGCTGATTGTAATGCTAAGTTAGAAAGATGGGAAGCTTCAATAGGAGACTATGAAATCTTATTAAAAGAGACACCGGAAGACGAGGAAGTAATCCAAGCATTGTCGGAGGCTAGGGTCCAACTTAAGAAACAACGAGGCGGATAA 1758 0.3953 MGDISPERKSGCGLMTTVFGRHRQRSKNASSTGSTPIPRRGASKEVVYDPPSHNVSNTSTTGSVSNSSYLSNNNNNNNNNNNTQRRNSNETAMPRGTSKNSNSSTTQGYVNQGRRVPKEVVGISGELDTMINDHQKSNSKGSTFVRASSGNVMLYGNLGNLRQGAKDNSYSNAMDTYNQYFENANTNSNVGGNTKNVSSINKETKSSTKLKEGKSGGGSLCRTISTRMDPEQLKIMGNEDYKNGQFAEALSLYDAAIAIDPKKAAYRSNRSAALTALGRLLEAVFECREAIQIDPHYQRAHHRLGSLHFRLGETDKALYHYKQAGPEADPDEVAKVKILQAHLNKCTEAQRVGDWNTLIVETSNTISSGADSAPQIFALQAEALLKLRRHQDADNVMSKCPNFNVDDCTKFFGPICNANLLVTRAQVDLAAGRFDDALEAAHKATRLDTNNKLANKVLGKARAVTGARCRGNELFKASKFSEACTVYGEGLQYDPYNSVLLCNRAACRSKLGQLEKAVEDCTAALNLRPSYTKARLRRADCNAKLERWEASIGDYEILLKETPEDEEVIQALSEARVQLKKQRGG 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02284 585 ProSiteProfiles TPR repeat profile. 418 451 IPR019734 GO:0005515
Tsu07g02284 585 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 583 IPR044534 -
Tsu07g02284 585 SMART tpr_5 264 297 IPR019734 GO:0005515
Tsu07g02284 585 SMART tpr_5 532 565 IPR019734 GO:0005515
Tsu07g02284 585 SMART tpr_5 230 263 IPR019734 GO:0005515
Tsu07g02284 585 SMART tpr_5 418 451 IPR019734 GO:0005515
Tsu07g02284 585 SMART tpr_5 498 531 IPR019734 GO:0005515
Tsu07g02284 585 SMART tpr_5 298 331 IPR019734 GO:0005515
Tsu07g02284 585 SMART tpr_5 464 497 IPR019734 GO:0005515
Tsu07g02284 585 MobiDBLite consensus disorder prediction 18 117 - -
Tsu07g02284 585 Gene3D Tetratricopeptide repeat domain 228 584 IPR011990 GO:0005515
Tsu07g02284 585 MobiDBLite consensus disorder prediction 21 38 - -
Tsu07g02284 585 MobiDBLite consensus disorder prediction 50 112 - -
Tsu07g02284 585 Pfam Tetratricopeptide repeat 237 296 - -
Tsu07g02284 585 PANTHER OS01G0616333 PROTEIN 5 583 - -
Tsu07g02284 585 Pfam Tetratricopeptide repeat 300 330 IPR019734 GO:0005515
Tsu07g02284 585 ProSiteProfiles TPR repeat profile. 230 263 IPR019734 GO:0005515
Tsu07g02284 585 MobiDBLite consensus disorder prediction 185 219 - -
Tsu07g02284 585 MobiDBLite consensus disorder prediction 185 204 - -
Tsu07g02284 585 SUPERFAMILY TPR-like 229 578 IPR011990 GO:0005515
Tsu07g02284 585 Pfam Tetratricopeptide repeat 501 530 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02284 Tsu-Chr7 25815514 25818284 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02284 242 534 Glycosyltransferase AT3G04240 22.867 2.64e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02284 - - lang:109326248 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02284 07 25815514 25818284 Tsu07g02284 07 25815514 25818284 ECH