Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02279 ATGGATTCCGGAAATAGTGGTAGTATGCAATCTTCAAGTTGTGGTGATGAAATTGAAGAGTATGATTCAAGAAGTGAGTCAAATCAATTCTCTATGTTTTTAAACAATCCACCATTATCTACACCAACACCATCAGCACCACCAAGAACAACAAGAACAAGTCATCTTTTAAATCAACCACCACAATCTTCATCTTTGCAACAACAAATGTTTGATCCATTAACCAATTATTACATGGATTCATTACAAAAACCATCATCAAACCAAAACTCATTTCTCAATCTTGACATGATGTGGTCTAAAGGTGCTAGTGCTACAGCTAGAtctgaacaaaacaacaatGATCTTAGCACTTTAATGATaccatcttcttcatcatcatcttctcatcaacaaaatcaacaagcTTTTTTATTAAGTCAATCCATGGTTCTTGGTCAAACAAGAGAAAACATTAACAACGTTGTTGGTTCTGGTTCTGTTCCCACCACACACCATTCTCTACCACTAGATCATCATCAACAACGTGGAACATCCCTCACCAATGATCAACAAAATcttcaaaacaacaataatatgGGTAGAAATCCTAAGAAAAGATCAAGAGCTTCAAGACGTGCACCAACAACAGTTTTAACAACAGATACAACAAATTTCAGAGCTATGGTTCAAGAATTTACTGGTATACCAGCACAACCATTTTCTTCACCTTTTCCAAGAACAAGATTAGATCTTTTTGGTTCTTCAAGATCTATTTCATCATCTCATATGGACCCTCCATTaacacaacaacaaccaccTTATCTTCTTCGACCTTTTGCTCAGAAAATTCAATCTACTCATAATCATCACTCTTTTCCACCTTCTTCTTCCATGGTGGAAAATTTACTAGCAGGTAATAATTCAACTAATAATTCAGCTACCATTAACTACCATTTATCTCAGCATCATCAGAATCAGCATCAGCATCCTCTAATGCAACACAACCAAATTCTCGGTTTTCAATCAATTTCtcaaacaccaacaacaaaATATCCAATTGGGTCCCACCAACAACCCTCCTTGGAAATCTCGCCCATTGTTGATTCTCATATCAAAAGGGGTCCTGTTTTTGAAGAATTATCTCATGTTAATAACAACAACATTGATATTGGTAGTGTTCTTCATCGTCAGACTCAGAACATGGTTCCCACATCGTCGGATGGAGTCAACAATAACATGTGTAATTCTTCGTCGGAGAATCTGTGGGGTACGAGAAcgactactactactactattaatGGTGGTGATCATCATGGAGGAATTCTTGGGAATCTGAGTGGCATTGAAGAAAGGAATTGTACATCAGATTTTGGTGTAGTGAAAGGACAAGAATGTGCTGTAGTGGCTACAACAACAAGAGGTGAAGGTACAGTGGAATCATGGATTAATTGTTCATCTTCTGATTAA 1449 0.3354 MDSGNSGSMQSSSCGDEIEEYDSRSESNQFSMFLNNPPLSTPTPSAPPRTTRTSHLLNQPPQSSSLQQQMFDPLTNYYMDSLQKPSSNQNSFLNLDMMWSKGASATARSEQNNNDLSTLMIPSSSSSSSHQQNQQAFLLSQSMVLGQTRENINNVVGSGSVPTTHHSLPLDHHQQRGTSLTNDQQNLQNNNNMGRNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAQPFSSPFPRTRLDLFGSSRSISSSHMDPPLTQQQPPYLLRPFAQKIQSTHNHHSFPPSSSMVENLLAGNNSTNNSATINYHLSQHHQNQHQHPLMQHNQILGFQSISQTPTTKYPIGSHQQPSLEISPIVDSHIKRGPVFEELSHVNNNNIDIGSVLHRQTQNMVPTSSDGVNNNMCNSSSENLWGTRTTTTTTINGGDHHGGILGNLSGIEERNCTSDFGVVKGQECAVVATTTRGEGTVESWINCSSSD 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02279 482 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 478 IPR039609 -
Tsu07g02279 482 MobiDBLite consensus disorder prediction 25 39 - -
Tsu07g02279 482 MobiDBLite consensus disorder prediction 1 16 - -
Tsu07g02279 482 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 478 - -
Tsu07g02279 482 MobiDBLite consensus disorder prediction 158 209 - -
Tsu07g02279 482 MobiDBLite consensus disorder prediction 46 66 - -
Tsu07g02279 482 MobiDBLite consensus disorder prediction 1 66 - -
Tsu07g02279 482 MobiDBLite consensus disorder prediction 158 197 - -
Tsu07g02279 482 Pfam VQ motif 206 233 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02279 Tsu-Chr7 25690376 25692690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02279 - - mtr:MTR_3g087390 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02279 07 25690376 25692690 Tsu07g02279 07 25690376 25692690 ECH