Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02263 atgttttACTCTCAGACATTTTTGGCGCGAAAAGGACCATTGTCAACAGTTTGGATCGCTGCTCACCTTCAGCACAGACTCAAGAAATCTCAATGGGCTTCCACTGACATTCCCTCTACAGTTCAACATATAATGGATCCTGGGGTTCCAATTGCATTGAGAATGTCAGCTCACCTACTCCTAGGTGTTGTTCGTATTTATTCGAAGAAAGTTGACTATCTTCTTAACGATTGCAATGCTGTTCGTACTGGTTTGTACAAAGTATTTCCTTCTGTGCCAAATAATACTTTACCTGAGGATGCGAGACAAGCACCTGTTCATTCTATCACCATGCCAGCCACTTTTGACCTTGATATGCTTGAGGTGGACTATGAAATAGATACTAACAGGTCAGAGGATGTTCACACGAGGAGTGAAGAAGAGATTACAATTCCAGATCCTATATCGAATAATTATATACGTTTTGATGAGggTGAAACATTTGGTGAATCGAATGAACAACCACCACCAGATTCTGACGCAGGACGAACGGAGGAAGTCATTATTCCTCGGTCTCCATCAACATACGTAGAGAGTCCAAGTACCCGCAGAGAGTCACACACTTGTGATGATAACCGAGATATCTTTCAGGATCCCAATACAAAAGAGGCAATGCCAGTGGAAGCTTTTCGTGATCCAACCAATGATAATGATACTATTGGAAATATACCAGACCCTGGGTCTAATGATACTGAACCTAATAGAGATTTCAATCAAACTGAGAATGAAGAGGATCCGATTGTTGAAATGACCGAGGTCCGTGTTGAAACCCCACCAGTTCAACCAACTGGACCTCCAACTCCAGTTTCTATTCAAGAAGGTGCCTCAGATGCACAAGTTAATGGAGGGGAAATTTCTCAACAAACTGCAGGTCATGGTTCTTTCGATTTTGGGATGATTCCTAGCCCTCAAATAGAGCAGAGACAGGATCAGGGACAGGATCAGAGGAATCAAAGAGGAAGGAAGAGAAAATTCTTCGATGATCCCATAGTCTTAACAAacgaATTCATGAGGAAAAACCTTAATGATACTCGCAAAATACTGCGGAAGAGAAAGGATGTTACTACTTTTGGTAATTGGGAATTGACGAGCAAACGATTGAAGGAGGATATTTTTGACCAACCTTTAATTCCAGGGTTATGTAACGAACTTATAAACATACACAAAAGAGAATATATACTTTCAAAACCCCACCTGGTCATCTCTGATGAAGTTGCTGACGAGCAAATGCCTGATGCACCTGAGATTATTGTTAATGCATCTGGTGTTGAGGATATTGAACACATGCGTTCTGATGCACCTGCTTCCCCTCCCATTATCCCAACTCATAGTATAGACACCGAACCCGTTATTGAAGGTAGTACTTACAAGAGTCCTGTTAGAAGTGATTTTGCAACTCCTCCTTCAGTTTCTGAGACAGTGGAGATACCACCATATGGTTCAACATCACCTCGTCCTCATGTATCAGAAATCGGTACCCCAAGCACATATCAAGATACAACACATCATAACTATGAGATTCCAGATACTAACCAATTGATCAATTCTCCAGAAAAAGAAGACCTTTATTTTCTGGAAGAAGATATCAACACCCCGGCTACATCCAGTTCACAAAGTACAAGCAAAAGTATTAGCACATTGTCTGGGAGGAGTAGGGGTGTGGCTCAATATCTAAAAGATTATTCTCCGTGTACCCCAATTCCGGAGCATCCTGCGGAAGACTTAAGCTTGAACAAGATATTGGATGGTAAAACTCGAAAGATTGCTGCCCGGATGTTCTTTGAAGTTTTGGTGTTAAAAACTCATGATCTTATTGATGTAAAACAAGAGGAGGCTTATGGTGATGTCAGTATCAAGTTGACTCCAACACTTTCAAAAgctaaaatttga 1929 0.4075 MFYSQTFLARKGPLSTVWIAAHLQHRLKKSQWASTDIPSTVQHIMDPGVPIALRMSAHLLLGVVRIYSKKVDYLLNDCNAVRTGLYKVFPSVPNNTLPEDARQAPVHSITMPATFDLDMLEVDYEIDTNRSEDVHTRSEEEITIPDPISNNYIRFDEGETFGESNEQPPPDSDAGRTEEVIIPRSPSTYVESPSTRRESHTCDDNRDIFQDPNTKEAMPVEAFRDPTNDNDTIGNIPDPGSNDTEPNRDFNQTENEEDPIVEMTEVRVETPPVQPTGPPTPVSIQEGASDAQVNGGEISQQTAGHGSFDFGMIPSPQIEQRQDQGQDQRNQRGRKRKFFDDPIVLTNEFMRKNLNDTRKILRKRKDVTTFGNWELTSKRLKEDIFDQPLIPGLCNELINIHKREYILSKPHLVISDEVADEQMPDAPEIIVNASGVEDIEHMRSDAPASPPIIPTHSIDTEPVIEGSTYKSPVRSDFATPPSVSETVEIPPYGSTSPRPHVSEIGTPSTYQDTTHHNYEIPDTNQLINSPEKEDLYFLEEDINTPATSSSQSTSKSISTLSGRSRGVAQYLKDYSPCTPIPEHPAEDLSLNKILDGKTRKIAARMFFEVLVLKTHDLIDVKQEEAYGDVSIKLTPTLSKAKI 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02263 642 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 3 1 642 - -
Tsu07g02263 642 Pfam Conserved region of Rad21 / Rec8 like protein 585 636 IPR006909 -
Tsu07g02263 642 MobiDBLite consensus disorder prediction 228 248 - -
Tsu07g02263 642 SUPERFAMILY "Winged helix" DNA-binding domain 567 637 IPR036390 -
Tsu07g02263 642 MobiDBLite consensus disorder prediction 159 257 - -
Tsu07g02263 642 MobiDBLite consensus disorder prediction 196 211 - -
Tsu07g02263 642 Gene3D Structural maintenance of chromosome 1. Chain E 543 641 IPR023093 -
Tsu07g02263 642 MobiDBLite consensus disorder prediction 470 511 - -
Tsu07g02263 642 Pfam N terminus of Rad21 / Rec8 like protein 1 97 IPR006910 GO:0005515
Tsu07g02263 642 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 642 IPR039781 GO:0007062|GO:0008278
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02263 Tsu-Chr7 25464545 25469292 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02263 K06670 - gmx:102661287 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02263 07 25464545 25469292 Tsu07g02263 07 25464545 25469292 ECH