Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02253 ATGAATTTGCAAGATTTCTTCTTAGCAGTAACAATCACCTTAGGCTTCATCAAAATATGCAAATATCTATTCAATTTTCTCAACTGGATATGGATCGTGTTCTTGAGACCAACAAAACAACTCAAAAAATATGGTTCTTGGGCTATAATCACTGGCTCCACTGATGGAATAGGTAAAGCTATGGCTTTTGAGTTTGCATCTAAGGGACTCAACATTCTCTTAGTTGGTAGAAACCCTCTTAAACTTGAGACAACATCAaaggagataatagataaaCATGGTGGAAATGTTAAGGTAAAGTGTGTTGTTATAGACATGCAAGATATCAGTGGAAAGGAAATAATGAAAAGGGTAGAAGAAGCAATAGATGGTTTAGATGTTGGAATTTTAGTTAATGGTGCTGGTGTGGCTTACCCTTATGCTAGATATTTTCATGAGgttgatttggatttgatggATTCTATTATCAAAGTGAATGTTGAAGGAACAACTTGGGTTACAAAAGCTGTGATTCCTAGTatgattaagaagaaaaaaggtgCTATTATTAACATTGGTTCTGGTTCTACTGTTGTTCTTCCTTCTTATCCTCTTGTCACACTTTATGCAGCTTCAAAAGCGTATCTTGCAATGTTCTCTTCATGCATCAATTTGGAATACAAGCATCAAGGAATTGACATCCAGTGTCAGGTTCCATTATTTGTGTCAACAAAAATGACAAGGATGAGAGCATCTCTTTTTGTTCCAGCACCAGAAATATATAGCAAAGCATGCACAAAGTGGATTGGCTATGAAAAACTGGTTGTACCATACTTCTTTCATGATCTGCAATCCTTTCTTATAAGGACAATTCCTGATGTATTCTTGGATTCCTACATGCTGCGTTATTTTCTATCCATGCGTAAAAGAGGACTCATTAAGGACTCAAAAAAAGCATCTAAGTAA 945 0.3386 MNLQDFFLAVTITLGFIKICKYLFNFLNWIWIVFLRPTKQLKKYGSWAIITGSTDGIGKAMAFEFASKGLNILLVGRNPLKLETTSKEIIDKHGGNVKVKCVVIDMQDISGKEIMKRVEEAIDGLDVGILVNGAGVAYPYARYFHEVDLDLMDSIIKVNVEGTTWVTKAVIPSMIKKKKGAIINIGSGSTVVLPSYPLVTLYAASKAYLAMFSSCINLEYKHQGIDIQCQVPLFVSTKMTRMRASLFVPAPEIYSKACTKWIGYEKLVVPYFFHDLQSFLIRTIPDVFLDSYMLRYFLSMRKRGLIKDSKKASK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02253 314 PANTHER RH59310P 2 311 - -
Tsu07g02253 314 PRINTS Glucose/ribitol dehydrogenase family signature 202 221 IPR002347 -
Tsu07g02253 314 PRINTS Glucose/ribitol dehydrogenase family signature 47 64 IPR002347 -
Tsu07g02253 314 PRINTS Glucose/ribitol dehydrogenase family signature 174 190 IPR002347 -
Tsu07g02253 314 PRINTS Glucose/ribitol dehydrogenase family signature 125 136 IPR002347 -
Tsu07g02253 314 PRINTS Glucose/ribitol dehydrogenase family signature 223 240 IPR002347 -
Tsu07g02253 314 Pfam short chain dehydrogenase 47 241 IPR002347 -
Tsu07g02253 314 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 188 IPR002347 -
Tsu07g02253 314 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 202 221 IPR002347 -
Tsu07g02253 314 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 136 IPR002347 -
Tsu07g02253 314 PIRSF 11-beta-HSD1 1 307 - -
Tsu07g02253 314 PANTHER ENOYL-(ACYL CARRIER) REDUCTASE 2 311 - -
Tsu07g02253 314 Gene3D - 40 266 - -
Tsu07g02253 314 CDD 17beta-HSD1_like_SDR_c 45 285 - -
Tsu07g02253 314 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 307 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02253 Tsu-Chr7 25419372 25421672 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02253 4 311 Lipid Metabolism Gene Families AT1G67730 51.290 1.33e-113 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02253 K10251 - gmx:100816067 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02253 07 25419372 25421672 Tsu07g02253 07 25419372 25421672 ECH