Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02149 ATGAATGATCAAAACAACTCCGAAGTTGCTGAAAAGGGTATAAATGATAAACCTGTTCGTGTTTATGCTGATGGAATTTACGATCTATTTCACTTTGGTCATGCTCGTTCTCTTGAACAAGCCAAGAAATCGTTTCCAAACACTTATCTCCTTGTTGGATGTTGCAATGATGAGACCACTCACAAGTACAAGGGTAAAACTGTTATGACTGAGGCGGAACGCTATGAGTCTCTTCGACACTGCAAGTGGGTTGATGAAGTTATTCCAGATGTGCCGTGGGTAATCAATCAGGAGTTTATTGACAAGCATCAAATTGACTATGTGGCACATGATGCTCTTCCTTATGCTGATACAAGTGGAGCTGGAAATGATGTCTATGAATTTGTTAAGGCTATTGGAAAATTTAAGGAAACAAAGCGGACCGAAGGAATTTCTACATCTGATATCATAATGAGAATCATCAAAGATTATAACCAGTATGTAATGCGTAATTTGGATCGTGGTTATTCAAGAAAGGAGCTAGGTGTTAGCTATGTCAAGGAGAAACGATTGAGAATGAACATGGGACTTAAGAAATTGCAGGAGAGAGTGAAGAAACAACAAGAGACCGTGGGAAAGAAGATAGGAACGGTGAAAAAAATTGCCGGCATGAACCGTACTGAATGGGTTGAAAATGCTGATCGATTAGTTGCTGGATTTCTTGAGATGTTTGAAGAAGGATGCCACAAAATGGGAACAGCAATTAGAGACAGAATTCAAGAACAACTGAAGGCACAACAGCTAAGATCTCTTCTTTATGATGAGGACGATGACGACGACGAATTCTATGATGATGAATCCGTAGAATTCTACAGCGACTAA 861 0.3949 MNDQNNSEVAEKGINDKPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKYKGKTVMTEAERYESLRHCKWVDEVIPDVPWVINQEFIDKHQIDYVAHDALPYADTSGAGNDVYEFVKAIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRNLDRGYSRKELGVSYVKEKRLRMNMGLKKLQERVKKQQETVGKKIGTVKKIAGMNRTEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQEQLKAQQLRSLLYDEDDDDDEFYDDESVEFYSD 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02149 286 SUPERFAMILY Nucleotidylyl transferase 20 152 - -
Tsu07g02149 286 CDD CCT 17 168 IPR041723 -
Tsu07g02149 286 Pfam Cytidylyltransferase-like 22 151 IPR004821 GO:0003824|GO:0009058
Tsu07g02149 286 Gene3D HUPs 2 239 IPR014729 -
Tsu07g02149 286 PANTHER CYTIDYLYLTRANSFERASE 3 281 IPR045049 GO:0004105|GO:0006657
Tsu07g02149 286 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 20 87 IPR004821 GO:0003824|GO:0009058
Tsu07g02149 286 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 3 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02149 Tsu-Chr7 23717860 23722474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02149 45 284 Acyl Lipid Metabolism Gene Families AT2G32260 75.197 1.60e-135 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02149 K00968 - gmx:100786249 484.182