Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02139 ATGATTTCCACTTTCACTTTGTTTCattctttcatcttcttcttgtttctACTCATCCTCATCTCAACTCCTTCACGTGCTTCTTTGTTTTCTGGAATTGAAACTGGAGATTTAGAAAAAATGGGTGATTTGTTTCCACAGATTCTAAGAGATGAGGCAGTGGCAAGACTTCTCGAGCTTGGAAAGGTCAGTGATGCTAGTGAATATCTTGAGAGGACATTTTTGAGTCCTGCAACCACGAGGGCAATTGATCTTATTCGAAAATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACATGGTAGAGTTGAGGGTGCAAATGCAAATACAGAAGCTTTATTGATCGGATCTCACATGGACACTGTTATTGATGCTGGTAAATTTGACGGAGCACTAGGAATAGTGTCTGCAATATCTGCTTTAAAGGTTATGCATGTCAACGGCAAGCTGCAAAATCTAAGGCGTCCTGTTGAGGTGATTGCATTTTGTGACGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGTAGTGGTGCTATAGCTGGTATTTTATCTGCCACGACATTGGAGATACCTGATAAGAAGAATGTAACGATAAAAGATGTTCTTAAAGAGAATTCAATAGAAGCTACGGAGGAAAGTCTTTTAAAGCTCAAGTATGATCCAAAATCTGTTTGGGGTTATGTCGAGCTTCACATCGAGCAGGGTCCGGTACTAGAACAAGTTGGTTTCCCACTTGGTGTGGTTAAAGGCATAGCTGGCCAGACACGATTGAAGGTTACGGTTAAAGGCTCGCAAGGTCATGCCGGAACAGTTCCAATGTTAATGCGCCAGGATCCTATGGTGGCTGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGCAAACATCCTGAAGAATACCTTTCTTCTGAGGGTTATTGCAGCGGTCCATCGATAAAATCACTTTCAAGTTCACTTGTTTGTACTGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTTACATATACCGTTGATATACGAGCAATTGATGATCTTGGACGTGAGGCCGTTATCTATGATTTGTCCAATCGAATTTATCAGATATGTGACAAGCGTTCAGTTTCATGCCTTATTGAACACAAGCATGATGCAGGTGCTGTAATTTGTGATTCTGAACTAAGTTCACAGCTTAAGTCTGCAGCTTATTCTGCACTCAAGAGAATGGAGGGTGACATTCAAGATGAAGTACCGATATTAATGAGTGGAGCAGGGCACGATGCCATGGCAATGTCTCGCTTAACAAAGGTGGGCATGTTATTTGTACGATGTCGTGGAGGCATAAGTCACTCTCCACAAGAGGATGTTCTAGATAACGATATATGGGCGGCTGGTTTAGCAACCTTATCATTTCTGGAAAATCTATAA 1431 0.4102 MISTFTLFHSFIFFLFLLILISTPSRASLFSGIETGDLEKMGDLFPQILRDEAVARLLELGKVSDASEYLERTFLSPATTRAIDLIRKWMEDAGLRTWVDQMGNVHGRVEGANANTEALLIGSHMDTVIDAGKFDGALGIVSAISALKVMHVNGKLQNLRRPVEVIAFCDEEGVRFQTTFLGSGAIAGILSATTLEIPDKKNVTIKDVLKENSIEATEESLLKLKYDPKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVKGSQGHAGTVPMLMRQDPMVAAAEQIVLMESLCKHPEEYLSSEGYCSGPSIKSLSSSLVCTVGEISTWPSASNVTYTVDIRAIDDLGREAVIYDLSNRIYQICDKRSVSCLIEHKHDAGAVICDSELSSQLKSAAYSALKRMEGDIQDEVPILMSGAGHDAMAMSRLTKVGMLFVRCRGGISHSPQEDVLDNDIWAAGLATLSFLENL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02139 476 Pfam Peptidase family M20/M25/M40 120 465 IPR002933 GO:0016787
Tsu07g02139 476 Gene3D Zn peptidases 63 466 - -
Tsu07g02139 476 PANTHER ALLANTOATE DEIMINASE-RELATED 42 470 IPR010158 GO:0016813
Tsu07g02139 476 SUPERFAMILY Bacterial exopeptidase dimerisation domain 260 387 IPR036264 -
Tsu07g02139 476 CDD M20_bAS 54 474 - -
Tsu07g02139 476 Gene3D - 260 387 - -
Tsu07g02139 476 PANTHER ALLANTOATE DEIMINASE-RELATED 42 470 - -
Tsu07g02139 476 SUPERFAMILY Zn-dependent exopeptidases 44 476 - -
Tsu07g02139 476 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 55 469 IPR010158 GO:0016813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02139 Tsu-Chr7 23560924 23565971 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02139 K02083 - gmx:100137075 793.882