Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01844 ATGTTGGTTTATCAGGATATCCTCACAGGTGACGAGCTTCTGTCTGACTCTTACCCATACAAGGAAATTGAGAATGGAATGTTATGGGAAGTTGAAGGAAAGTGGGTTGTTAGTGGACCTTGTGATGTTGACATTGGTGCAAACCCTTCTGCTGAAGGGGGTGAAGATGAGGGAGTTGATGACACAACTGTTAAGGTTGTCGACATCGTTGATGTATTCAGACTTCAGGAACAACCTGCTTTTGACAAGAAGCAGTTTCTTGGCTTCGTTAAGAGGTACATTAAGTTGTTGACACCCAAACTAGATGCAGAGAAACAAGAGCTGTTTAAGAAGCACATTGAGGGTGCAACTAAATTCCTCCTCAGCAAGCTCAAGGACCTTCAGTTCTTTGTTGGTGAGAGCATGCATGATGATGGTAGCTTGGTCTTTGCCTACTACAAGGAGGGTGCTACTGATCCCACATTTCTCTACTTTGCATATGCTTTGAAGGAGATCAAGTGCTAA 504 0.4345 MLVYQDILTGDELLSDSYPYKEIENGMLWEVEGKWVVSGPCDVDIGANPSAEGGEDEGVDDTTVKVVDIVDVFRLQEQPAFDKKQFLGFVKRYIKLLTPKLDAEKQELFKKHIEGATKFLLSKLKDLQFFVGESMHDDGSLVFAYYKEGATDPTFLYFAYALKEIKC 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01844 167 PANTHER TRANSLATIONALLY-CONTROLLED TUMOR PROTEIN HOMOLOG 1 167 - -
Tsu07g01844 167 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 1. 45 55 IPR018103 -
Tsu07g01844 167 PANTHER TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED 1 167 IPR018105 -
Tsu07g01844 167 ProSiteProfiles Translationally controlled tumor protein (TCTP) domain profile. 1 167 IPR034737 -
Tsu07g01844 167 SUPERFAMILY Mss4-like 1 167 IPR011057 -
Tsu07g01844 167 Gene3D Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A 1 167 IPR011323 -
Tsu07g01844 167 Pfam Translationally controlled tumour protein 1 163 IPR018105 -
Tsu07g01844 167 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 2. 124 146 IPR018103 -
Tsu07g01844 167 PRINTS Translationally controlled tumour protein signature 1 21 IPR018105 -
Tsu07g01844 167 PRINTS Translationally controlled tumour protein signature 46 57 IPR018105 -
Tsu07g01844 167 PRINTS Translationally controlled tumour protein signature 59 78 IPR018105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01844 Tsu-Chr7 18493649 18496603 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01844 - - mus:103985513 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01844 07 18493649 18496603 Tsu07g01844 07 18493649 18496603 ECH