Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01843 ATGGAAGAAACCATATCCCGCATCGTAACAGAAATCGAAGACCTCCGCGAAAACCACCACATCGACAATCCACAACCACTCTCCGAACAATCCCTCACCGATCTCCAAAACCTCCTCAAAAACTCCCAACCCTTAGACCAACTCTACGACGCCGTTTCACCTTCTCACCTCATTCCACCAATCGCCACCGCAATGGATTCATCACCAACTCCTCACTCTCTCCTCGCTTCTCATGTCTTCCTCTCTTTTCTCCTCTCTCCAAACGCTCCCGTTTTCACTCTCTTCACTCCTCTTTCATTTCTCTCCTTTCTCCGTTCAATTCGTCGTTCATTCAAAAACCATAACCCTAATACCAACCCTCAACAAGTTCGAAAACGAAAACGGaactcaaaaaacaaaaaatctgttcaaaatgatgaagatgaacctAATTCCCCAAATTCTATACAAAAACTCGATGTTAGGGTTTTACTTCCGCTTTTCGAGAAATTAGTTAGTGTTATGTCGTTAATTCATCTCGATCGTTTTCCGGAAAGTTTGAAATCGTTAGTTCAAACGATTTCTGAGGTTCCTTTGACAGCTATTGAGTCTTGTGGAAATGAGGTTCAATATAGTAGATTAGTTGGTTTATGCGCGAggattttgaaagaggttttgaaaCCGGAGCATGGTGAGCCTTCAGAGACTGCTGCTGAGGTTTTGAAGGCGTTGTCTCCGCTTGTTGTAATGCCGAAATCTCAGGTTAGGAGTTTTGCTATTGGTTTTGTTACTAGTCTTGCCAGGGATTCTGTTGGTGTGAAGAAAGCGTTGGTTAATTTTCCGAGGTATTTGGCGCATAAGGCGCCGGATAAAGCTGAGCCTAGGGCATTGGCTGTGGATTTTACAATGGAGATTGTTAGGGTTATGGAATTGGGGGATCAGGTTGAGTTTGTGAAGTATGTTGTGAAGATGACTCAAGGGAAAACCAATTTAAGGCTTTTAGGGGTTGATCTTATTTTGAATTTGGTGACTTTGTTGAAGGATCCTTTAGGGGTGAATTCGATGGAGGAAGAAGGGAAAGAGGCGTGGGGATTGTGGTGTTTAGAGGCGTTGGTGAAGCGTTGTTCGGATGTTAGTGCTACGATTCGAGGGCGGGCTTTGTCGAGTTTGGCGCAGGTTGTTGGGTTTTTATCTGGTAGTGATAAGGCTAGTTTGGTTTTGAAAGAGTTTATGGGGTTTGGTGATGGAAATGTGGTGGGTGTGGGAGGAAAGGAAATCAATGAGATGCTGAGGAGAAGGTGTGTGGATGAGAAGGCGAATGTGAGAAAAGCTGCTCTTTTGCTTGTTACTAACTTGACTGCTCTACTTGGAGGTGCGATTGATGAAGTGGTGCTTAAGACAATGGGAATGGCTTGTTCCGATTCACTTGTTAGCATTCGGAAAGCGGCTGTTGCAGCTCTTTCTGAGGCTTTCAGAACATTCTCATCTGAAACAGTAATAACTGAATGGCTACATTCAGTTCCTCGTCAAATAGCTGACAATGAAACTAGCATCCAAGAAGAATGTGAGAACGTGTTTCAAGAACTTATGGAGATGCCTTTCCCGCAAGGAATTCTGTATCTCCTGAGAGAGATTTGCAATGGGGAGGTGAGTCCTTGGgtgaaaaaaatttgcacaaaCCTGGGAAAAAAGAAACGGTTGAAtcttaaaattgtttttgcacTTCAGAATATAATCAAGGTGTCTGAGTCTATCTGGCTGAACCATAGCAGGCCAATAGAAAAGTGGACTGCCCCACCAGGTGCTTGGTTTCTTTTATCAGAGGTGTCAGTATTCCTTCCAAAAGCAGTGGACTGGGATTTTCTTCAACATCATTGGCTGCTTCTTGACAAACATAAAGTGAAAGGTGAGTTTAGAAGCCCATTTGCACaaaaaaatgcatttgaaaACGAAGAAAGCATAGAATGCAATAATGTTGCCTGGGCTAGTGACCGAGTTTTCCTCTTGCAAACAATCTCTAATGTTTCTGTGGAACTGCCACTTAAACCTGCCGCTGACTTGGCTCATAATTTACTCGGACGggttaaaaaattcaacatgCATTCAACAGAGGTTGATGCTCATGTAAAAGCACTTAAAACATTGTGCAAAAGAAAAGCTGAAGATGCCACGGAGGCTGAGGAATTAGTCTTGAGATGCGTATACGAAGTTCTGTTCAAAGCTActcaaataatagaaaattttatttcagACTATTCAGAGCAGAATGCAGAAACTGACTTCTTCACTCCACCCAGAAGTGGGCCGAGTAAAGGTAGGAAATCAGTAAGAAAGCGCAAGTCATTGTCAAAAGCAATTACAGCGATTTATACAATTGGGTCTTTAGTTATTGTCTGCCCATCTGCTGATATGAGCACTGTAAGTCCATTATTGCACACTATAATCACCTCTGGGAAATCTGTCCCAAAATTAAATAAGCTACCGGGCTCTGCAACTTCTCTACAAGAAGAAGCTCCTTCTTTTTATATTCAAGGGTGGCTGACCATGGGAAAACTTTGCCTTGCTGATGGGAAGCTTGCAAAGAACTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGACCAACTTAGCAGCTCTTCGCAATAATATTGTGGTCATGATGGCAGATTTCTGCGTTCGGTACACTGCTCTTATTGATGGTTACATAACCAAGATCACAAGGTGTCTCTTAGATCCCTGTGAACTTGTGAGAAGGCAAACATTCATATTGCTATCAAGATTGTTGcagAGAGACTATGTCAAGTGGAGAGGAGTGCTATTTCTTCGTTTCCTTTTGTCCCTTGTTGATGAATCAGAAAAGATTAGGCAGCTAGCGGATTTTCTCTTCGGAAATATTTTGAAAGTCAAGTCTCCTCTTTTAGCATATAATAGTTTTGTTGAggctgtttttgttttgaatgacTGCCATGCCCACACTGGACATCGTGAGTCCAACGAATCACGAACGGAAAGCCAACTTTTTTCCATCAGGGGCACTGACGAAAGATCAAGGTCTAGAAGAATGCACATTTATGTTTCTCTACTAAAGCAAATGGCTCCTGAGCATCTTCTAGCAACCTTTGCCAAGTTATGTTCAGAAATCCTAGCTGCAGCTTCTGATGGTTTGCTCAATATAGAAGATGCAACTGGACAGTCTGTTCTACAGGATACTTTTCAAATTCTTGGCTGTAAAGAGATACGCTTTCAATCTACTCGTCTATCATCTGAGTCGGCAGACTtagaagaagaaggaggagaAAATGGATCTTCAACTAGAAAGGCTATAACTCAGGCAGTCAAGAAGGGCCTTATTCAAAACACTGTACCCATCTTCATAGAGTTGAAACGTCTGTTGGAAACCAAGAACAGTCCCCTCATAGGCTCTCTCATGGAGTGCCTTCGGGTCCTTCTCAAGGACTACAAAAATGAGATTGATGACATATTGGTTGCTGATAAACAGCTGCAGAAAGAGCTTATCTATGACATGCAGAAATATGAAGCAGCAAAAGCTAAAGCAACAGTTGCTGAGGCTGCAGCCTCCAAGCCAAATACAGCTGCTTTTAAATCACCTGATGTTTCTAAGAATCCGACCAAGGAACATGCTGAAACACGTGCACAAGGTGAGGACAGTGACAAGTTTCCAAGTGGTTCAAAAATTGCTTCAGCAATGGCAGATGCTGCAGCTGCAGCAACAGCTCGTTCTGTGCTCAAGGAAATTAACAAGGGTGCAGCGACACCACAACTTAGTTCTTTGAACGTTCCGAAAGTCAAGTCTTTTACTGGTGAATGCGTATCTAGAGGTGATAGGCGATTGGATCTCATAAAATCTTTGCAGAAAAAACATTCTTTCGATTCTGATGATGAAAACTAA 3888 0.4066 MEETISRIVTEIEDLRENHHIDNPQPLSEQSLTDLQNLLKNSQPLDQLYDAVSPSHLIPPIATAMDSSPTPHSLLASHVFLSFLLSPNAPVFTLFTPLSFLSFLRSIRRSFKNHNPNTNPQQVRKRKRNSKNKKSVQNDEDEPNSPNSIQKLDVRVLLPLFEKLVSVMSLIHLDRFPESLKSLVQTISEVPLTAIESCGNEVQYSRLVGLCARILKEVLKPEHGEPSETAAEVLKALSPLVVMPKSQVRSFAIGFVTSLARDSVGVKKALVNFPRYLAHKAPDKAEPRALAVDFTMEIVRVMELGDQVEFVKYVVKMTQGKTNLRLLGVDLILNLVTLLKDPLGVNSMEEEGKEAWGLWCLEALVKRCSDVSATIRGRALSSLAQVVGFLSGSDKASLVLKEFMGFGDGNVVGVGGKEINEMLRRRCVDEKANVRKAALLLVTNLTALLGGAIDEVVLKTMGMACSDSLVSIRKAAVAALSEAFRTFSSETVITEWLHSVPRQIADNETSIQEECENVFQELMEMPFPQGILYLLREICNGEVSPWVKKICTNLGKKKRLNLKIVFALQNIIKVSESIWLNHSRPIEKWTAPPGAWFLLSEVSVFLPKAVDWDFLQHHWLLLDKHKVKGEFRSPFAQKNAFENEESIECNNVAWASDRVFLLQTISNVSVELPLKPAADLAHNLLGRVKKFNMHSTEVDAHVKALKTLCKRKAEDATEAEELVLRCVYEVLFKATQIIENFISDYSEQNAETDFFTPPRSGPSKGRKSVRKRKSLSKAITAIYTIGSLVIVCPSADMSTVSPLLHTIITSGKSVPKLNKLPGSATSLQEEAPSFYIQGWLTMGKLCLADGKLAKNYIPLFVQELEKTNLAALRNNIVVMMADFCVRYTALIDGYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKSPLLAYNSFVEAVFVLNDCHAHTGHRESNESRTESQLFSIRGTDERSRSRRMHIYVSLLKQMAPEHLLATFAKLCSEILAAASDGLLNIEDATGQSVLQDTFQILGCKEIRFQSTRLSSESADLEEEGGENGSSTRKAITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAAKAKATVAEAAASKPNTAAFKSPDVSKNPTKEHAETRAQGEDSDKFPSGSKIASAMADAAAAATARSVLKEINKGAATPQLSSLNVPKVKSFTGECVSRGDRRLDLIKSLQKKHSFDSDDEN 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01843 1295 Coils Coil 1143 1163 - -
Tsu07g01843 1295 MobiDBLite consensus disorder prediction 111 147 - -
Tsu07g01843 1295 PANTHER CONDENSIN 2 1283 IPR026971 GO:0007076
Tsu07g01843 1295 MobiDBLite consensus disorder prediction 1199 1217 - -
Tsu07g01843 1295 Pfam non-SMC mitotic condensation complex subunit 1 872 1066 IPR032682 -
Tsu07g01843 1295 SUPERFAMILY ARM repeat 308 1147 IPR016024 -
Tsu07g01843 1295 MobiDBLite consensus disorder prediction 1185 1222 - -
Tsu07g01843 1295 Gene3D - 360 525 IPR011989 -
Tsu07g01843 1295 PANTHER CONDENSIN-2 COMPLEX SUBUNIT D3 2 1283 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01843 K11491 - gmx:100793666 1800.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01843 07 18402384 18408781 Tsu07g01843 07 18402384 18408781 ECH