Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01842 ATGAGTTCAGAAGGTTTCCGTGAGGACAGAGGTCAAAAGCCCTCTAGGATCGTAATAACCTATGACCCggtgcgagaacctgactacaGACAGGTCAAAAAAGGAACCTCATGGGTTCTAAGCTCGTTTGGCCTTATCGAACTCGTAGGATCACAAGAACCTAAGAGCCgTTTAAGCAGGAAAAACCTTGAAACAACAACTTTCTCTATAACTTGTTTTGGTTCCTTCTCTTATCTCATATTCCATTCCACCGAATCTGGTCAAAATCGATCTCAATTTTCTGCCATGGAAGGTAACAAAGACGAAGCATTAAGATCCATTCGAATCGCAGAAGAAGCAATTGCTTCAGGTAACAAAGATCGCGCtctcaaattcatcaaaatcgCTCAGCGGTTAAATCGTGATTTACCGCTTGATTCTCTTTTCACTAAATGTGAACGACTTGATTCTCAGTCCACGGCATCTTCCTCCGGCGCTGGCACCTCGCCGGTGAAGGATAAGCCGGGGAGAATCAAAGAGGATGGTTTGAATGTAGAGAAGAATTATACGGAAGAGAATGTTAAATTGATTAGGGAAATTAAAGGGAAAAGTGATTATTATTCGATTTTAGGGTTAGAGAAGAGTTGTTCTGTTGAAGAGATTAGGAAGGCTTATAGGAAATTGTCTTTGAAAGTTCATCCTGATAAGAATAAAGCGCCGGGTTCGGAAGATGCATTTAAGAAAGTTTCTAAGGCTTTTAAGTGTTTGAGTGATGATGGTTCTAGAAGGGATTATGATCAAGGAGGGTTGGTTGATGAATTTGATTCGAATTATAATCAGCATGATAATGATTTTAGGCGAAGGAGGAGAAGGGGTACAACGGCtcatgatatttttgaagatgAATTTGATCCTGATGAGATATTTAGAGCTTTCTTTGGACAATCGGATGCACGGAGAAATTATGTTTATAGGACTCGGGGCGGTGGTGGTGGGATGGGTAGTCAACAACGTCAGAGGCACGAGGTTCAGGGTGGAGGACATTATCTTATGTTGTTGATTCAGCTTCTTCCTTTGTTGATAATTGTGTTGCTTGCTTACTTGCCCTTTACGGATCCTGAATATTCCTTGCATAAGAATCAGTCTTACCCGATTCTAAAGGTTACTGAGGATTATGGGGTTCTGTTTTTTGTGAAATCTCAGGCATTTGATGCTAAATATCCGATTGGAAGTTCGGCTCGTGAGGCCATTGAGGATAATATTATAAAGGATTATAAGAATATGCTTCGTCGTTATTGTCAAATGGAGCTTCAGAGGCGTACTTGGAATAGGAATTTGCCCGTTCCTCATTGTGAAAAGCTGCATAACTTTGGCGTTGTAGCATGA 1365 0.3934 MSSEGFREDRGQKPSRIVITYDPVREPDYRQVKKGTSWVLSSFGLIELVGSQEPKSRLSRKNLETTTFSITCFGSFSYLIFHSTESGQNRSQFSAMEGNKDEALRSIRIAEEAIASGNKDRALKFIKIAQRLNRDLPLDSLFTKCERLDSQSTASSSGAGTSPVKDKPGRIKEDGLNVEKNYTEENVKLIREIKGKSDYYSILGLEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRDYDQGGLVDEFDSNYNQHDNDFRRRRRRGTTAHDIFEDEFDPDEIFRAFFGQSDARRNYVYRTRGGGGGMGSQQRQRHEVQGGGHYLMLLIQLLPLLIIVLLAYLPFTDPEYSLHKNQSYPILKVTEDYGVLFFVKSQAFDAKYPIGSSAREAIEDNIIKDYKNMLRRYCQMELQRRTWNRNLPVPHCEKLHNFGVVA 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01842 454 ProSiteProfiles dnaJ domain profile. 198 262 IPR001623 -
Tsu07g01842 454 Pfam DnaJ domain 198 259 IPR001623 -
Tsu07g01842 454 PRINTS DnaJ domain signature 200 218 IPR001623 -
Tsu07g01842 454 PRINTS DnaJ domain signature 218 233 IPR001623 -
Tsu07g01842 454 PRINTS DnaJ domain signature 234 254 IPR001623 -
Tsu07g01842 454 PANTHER CHAPERONE PROTEIN DNAJ 49 96 452 - -
Tsu07g01842 454 SMART dnaj_3 197 254 IPR001623 -
Tsu07g01842 454 Gene3D DnaJ domain 195 317 IPR036869 -
Tsu07g01842 454 CDD DnaJ 198 251 IPR001623 -
Tsu07g01842 454 MobiDBLite consensus disorder prediction 151 173 - -
Tsu07g01842 454 PANTHER AT29763P-RELATED 96 452 - -
Tsu07g01842 454 SUPERFAMILY Chaperone J-domain 194 265 IPR036869 -
Tsu07g01842 454 Pfam Domain of unknown function (DUF1977) 364 434 IPR015399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01842 Tsu-Chr7 18365733 18368086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01842 190 260 Miscellaneous Gene Families AT1G16680 39.189 1.03e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01842 K09518 - gmx:100820432 449.899