Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01833 ATGTTTgaagagaataatttttttgatgaaatGGAACAAGAAGCTGTTGATTTCCATAGTAAAATCAATGCAAAATCTGGATTCAGTGATGAAACATCAATTCCTCCATCACTAGCTCAAATACCAAAAGTTAAAGCTATCACCTATGCACTTGAAGAAGCTGAATTAATCATGTATTCAGCAGTAGATGATCTTTTgcagaaaacaaaaatcaaccCGAAAACCATCGACATTTTAATAACTAACAGTAGCATTTTCTGTCCTACGCCGTCTCTTAGTTCAATGGTGGTTAACAAGTTCAAGATGAGAAGTAACATTATGAATTTCCATTTATCAGGTATGGGATGCAGTGCTGGAATTATAGCTGTTAATCTTGCAAAAGACTTGTTGAGAGTTCATAGAAACTCATTGGCTTTAATAGTAAGCACAGAGACACTTAGTTTAAATTGGTACACAGGTAAAGTTCCATCTATGCTACTAACAAATTGTCTATTCAGAATGGGAGGATCAGCTATATTAATGTCTAGCAGGGTTCAAGATAAGCATAAGGCAAAGTATGAGCTAAAACATATTGTTAGAACAATTAATGCATATGATGATAAATCTTATGCATGTGTATACCAGGATGTGGATTCAGAGAACAAAGAAGGTGTATCGATATCGAAGAACATAGTCAATGTTTGTGGAGATGtgttgaagaaaaatattgtttcattGGGACCATTGGTTTTGCCATGGAGAGAGCAATTCCTGTATgtaatttcaattatttattataaactatGGAGTAGAAGAAGCACAAGCATATATACTCCGAAATTCAACAGAGCTTTTGAGCATTTCTGCATACATTCAGGAGGGAGAGCTGTTATACAAGCTATTGAGAAAAACTTGATGCTAAGGAAACAAGATATTGAGCCATCACAAATGACTCTTTACAGATTTGGaaacacttcatcttcttcaatttgGTATGAGTTGTGCTACATAGAAGCAAAAGGGAGGATGAAATGTGGTGATAGAGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAGTGCAACAGTGCAGTGTGGAAATGTCTAGGTGATGTGAAACCTGATATTTACACAGCATGGAGGGACACAATTCATTCATACCCAGTAGATATTTTGGAAACAAACTGA 1164 0.3308 MFEENNFFDEMEQEAVDFHSKINAKSGFSDETSIPPSLAQIPKVKAITYALEEAELIMYSAVDDLLQKTKINPKTIDILITNSSIFCPTPSLSSMVVNKFKMRSNIMNFHLSGMGCSAGIIAVNLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLTNCLFRMGGSAILMSSRVQDKHKAKYELKHIVRTINAYDDKSYACVYQDVDSENKEGVSISKNIVNVCGDVLKKNIVSLGPLVLPWREQFLYVISIIYYKLWSRRSTSIYTPKFNRAFEHFCIHSGGRAVIQAIEKNLMLRKQDIEPSQMTLYRFGNTSSSSIWYELCYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCLGDVKPDIYTAWRDTIHSYPVDILETN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01833 387 PANTHER 3-KETOACYL-COA SYNTHASE 1 384 IPR012392 GO:0006633|GO:0016020|GO:0016747
Tsu07g01833 387 Gene3D - 4 359 IPR016039 GO:0016746
Tsu07g01833 387 SUPERFAMILY Thiolase-like 13 177 IPR016039 GO:0016746
Tsu07g01833 387 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 1 384 - -
Tsu07g01833 387 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 278 359 IPR013747 -
Tsu07g01833 387 SUPERFAMILY Thiolase-like 189 360 IPR016039 GO:0016746
Tsu07g01833 387 Pfam FAE1/Type III polyketide synthase-like protein 8 260 IPR013601 GO:0006633|GO:0016020|GO:0016747
Tsu07g01833 387 CDD CHS_like 50 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01833 Tsu-Chr7 18292627 18293790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01833 11 381 Acyl Lipid Metabolism Gene Families AT1G71160 56.334 1.49e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01833 K15397 - gmx:100783404 620.928