Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01823 ATGCTTGCTCAAGAGAAATCTCAAAAGACATACCCGACAACTGCTGAGgTGGTGGACGAGCTAAAGAGAATGGTGGACATAGGTTTCCCTATAGTAGCCATGAGCCTTGCAGGATACCTCAAAAACATGATCTTAGTTGTATGCATGGGAAAGTTGGGAAGCCTTGAGTTAGCAAGTGGTGCTTTGGCCATAGGCTTCACCAATATAACCGGTTACTCGGTCCTTTCGGGTCTTGCCATGGGAATGGAGCCTCTATGCACTCAAGCCATTGGTTCACAAAACTTCTCCTTAGTTTCTCTCATATTAAGAAGAACAATCTTAATGTTATTACTAGCTTCCTTACCAATTTCACTCTTGTGGCTCAATCTTGAGCCACTCATGCTATGCCTTCACCAGAATCAAGACATAACAAGAATAGCAAGCCTCTATTGTCGTCTCTCGATCCCTGATCTTATAGCGAATAGCTTCCTTCACCCAATTCGCATCTATTTACGTAGCAAAGGAACAACTTGGCCACTATTATGGTGCACTTCACTCTCCATTCTCATTCACATACCCATCATCATTTTCTTAACCTTCAAACTTCACCTTGGTGTACAAGGTATTGCTATTTCAGCTTTTGTTGCAAATTTCAATACCCTTCTCTTTCTTTTATCATACATGTTCTACATCCATTTCTCAAAGGTTTCAATCTCCATACCAAACCCTAGTCCTCCCTTATTATCATCAcaacaagaaaaacaaacaagtatTAAAACCCTAGGAAAAGAATGGAACATGTTAATTAGGTTTTCAATTCAAAGTTGTCTTGGAGTTTGCTTAGAATGGTGGTGGTATGAATTCATGACAATTCTAGCTGGTTACCTCTATAACCCTCGTGTAGCTTTAGCAACAGCTGGAATAGTAATACAAACAACATCACTTATGTACACTTTACCAACAGCACTTAGTGCTTCGGTGTCAACAAGAGTAGGAAATGAACTTGGAGCTAGTCAGCCATCAAGGGCAAATTTGTCAACTATGGTAGCAATAGGAATGTCACTAGTAAGTTCAACATTAGGCTTATTATGGACAACATTAGGTAGAGAAAAATGGGGTAAAGTGTTCACAAATGATAAAGAGGTTTTAGATTTAACAATGATTGTTTTACCTATAATTGGTGTTTGTGAATTAGCAAATTGTCCACAAACAACATGTTGTGGAATACTTAGAGGAAGTGCAAGGCCAGGTATTGGGGCAGGgataaatttttattcattttatctTGTGGGGGCGCCAATAGGAATAATTTTGGGGTTTGTTTTGAAATTAGGGTTGGTGGGGTTTTGTTATGGTTTGTTGGCAGCACAAATAGCATGTGTGGTTTCAATTTTAGTAGTGATATATAACACTGATTGGGAAAGAGAGTCATTGAAAGCAAAAAGCTTAGTTGGCAAAGGTGGTTCATGTGACACATTGTTTGCacatgtttttgttgttgaagaCCAAACAGTCAAATGTGAGCAAGGTATTGTCTTTCTCAATGACAACAAGTTATGA 1539 0.3775 MLAQEKSQKTYPTTAEVVDELKRMVDIGFPIVAMSLAGYLKNMILVVCMGKLGSLELASGALAIGFTNITGYSVLSGLAMGMEPLCTQAIGSQNFSLVSLILRRTILMLLLASLPISLLWLNLEPLMLCLHQNQDITRIASLYCRLSIPDLIANSFLHPIRIYLRSKGTTWPLLWCTSLSILIHIPIIIFLTFKLHLGVQGIAISAFVANFNTLLFLLSYMFYIHFSKVSISIPNPSPPLLSSQQEKQTSIKTLGKEWNMLIRFSIQSCLGVCLEWWWYEFMTILAGYLYNPRVALATAGIVIQTTSLMYTLPTALSASVSTRVGNELGASQPSRANLSTMVAIGMSLVSSTLGLLWTTLGREKWGKVFTNDKEVLDLTMIVLPIIGVCELANCPQTTCCGILRGSARPGIGAGINFYSFYLVGAPIGIILGFVLKLGLVGFCYGLLAAQIACVVSILVVIYNTDWERESLKAKSLVGKGGSCDTLFAHVFVVEDQTVKCEQGIVFLNDNKL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01823 512 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 482 - -
Tsu07g01823 512 Pfam MatE 30 187 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g01823 512 Pfam MatE 269 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g01823 512 CDD MATE_eukaryotic 20 472 IPR045069 GO:0042910|GO:1990961
Tsu07g01823 512 TIGRFAM matE: MATE efflux family protein 30 442 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g01823 512 PANTHER PROTEIN DETOXIFICATION 55 12 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01823 Tsu-Chr7 18190326 18192553 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01823 K03327 - gmx:100785533 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01823 07 18190326 18192553 Tsu07g01823 07 18190326 18192553 ECH