Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01816 ATGACTAAAGATACACCGGAATCAAGTGGAGGAGCATTCCACACGGTTCATGCAGAGCGTGATTTACAATCCAATTGGGAAGTTGACCTAGCAAAGAAACTTGAAGAGTATTTGCTTAAAATTTGCTCTGGTGAAATCACTGGTGAAGATGAAGGAAATATTCATGTGAATTTTGCTGAAGCTGCTCTGCTTCTTCAGGGTTCGATTCAGGTGTATAGTCGAAAGGTTGAATATCTCTACAACTTGGTGTTGCGTACTTTGGAGTTCCTTTCTCAGAAAAGACAGGCAGATCAGGTAGATGGGGAATCAGTCCAACCTGAAGAAGCTGGCCCATCCGCTGTTGCtgatgaagaaaatgatcaATTCTGGGGCTTTGATGACATCCCAGTTGATGAAAAGAATTCATTGGATAGTTCAACAGGCAAAGATGTGAATTTGGATCAATTCATAAAACCGCCTGCCAATCTAGTTGTTCTTGAAGGTGATTGCTTGGATACTGGCGGTGATGGAGGGGAATTGGAATCTTATCTGCTGTCCACCACTGACTTGTACcaggattttattttattggacaCATCCGATGCTGTTGCAGTTCATGAGTTTTTGAAGGGCCAGAATGCTGGTGCGACACATTGTGGTACTAATAGAGCAACTTCAATTCGTAAAAGTTTTCTTTCTCCTAGACGTTCTGGTGGAAGTGCTCATAAATCAGTTGCAAAGAGTCAGCGTGCTAATTCCGTGTTCTCTCctaaaaatattagttttgaAGACCAAAATGCTCGGCCCAGTTCTCCGACCTCTGCTGGTTTCGATAGCGGTAACTTTGGACCTAATATGGATGATGGATTTGATGCACCAATTGATACAGACAattctgatgaagatgatgatgatccCTGGATACCATTGAATCCTCATGAACCAGGAAACTTGAGAGTGAAGCCCTTTCGAAAAGTGAAAGTTTCAAAAAAAGTTAGAATCAATGTGAGACCTCGAGTATCTATGACCACCTTGTTTCCACTTGCAAAATTGCATGGTCCTATCAGTCCAGAGCTCACGAAAATGTGGGAGATGCGACGATGTGCCCATCAACGACAAAAGGATTCTGAATCTTCTCCACCATTATATGAGAAGCTGAGGCAATCTCTTATTAACGGGGAAAATGAAACTGATGAACCATTTCTCAACACTGAAGATAACAATGTCAACGATGACAACGAATTTGATAATGGAAATTCCGATTTTGATATGCCTGGCAATGACTTCATGGATGAAGATCTACACCCTTTCAATCAAGAGCACggagttgatgatgttgatgctCATGCTGATGAAGCTGTAGATCTCGAATTTCCAGATTCTCAGACAAGTTTGGAAGATCTCTGCCGCTCTCATCTTAATGCTCTCCTAGCTAGCATAGCTGAAACAGAGAAGCAAACAGAAATGGCTGCTAGGGTTTCAACATGGAAACAAAGAATTGAGCACAACTTAGAAGAACAGGAATCACACCCACCGTTTGATATCCGAGACTACGGTGAAAGAATTCTTGACAAACTATCCCTTGAAGAAAGCGGTAGTAGTGTTATGCCCTTTTCTGATTTGGTCACGGGACAAGTAAAGTATGACGTCTCCCGAAGTTTCTCTTCACTTCTTCAACTGGTGAACAATGGAGAAGTTGATTTACAAAGACACGATGTCGCCGGTGAGTCTTTTTGTTACACATCTGTTTATCCTTTTCATGTCAAGCTCCTAAAGCATCACAAGAAAAAGGAGGTTGCAAAGCAGTTTGGTATATCGAAAAAGCGAGCAAAGTCTCCAATAAAAAAACCGTCTCCAAATGGTGAGAAAAAAACTAGAAGAGAAAAGTCTCCGACAAGAAAACCGTCtccaaaagaagatgaaaagaagaaaactaGAAGAGAAAAGTCTCCCATCAGTTCATCTTCTAGGAATCATCGATCGACAAGTTTATCATCACCTATCAATACCAGATCATCTTCTAGGAAACATGGACCGGCAGGTTTATCATCACCTACCAATACCGGTTCATCTTATAGGAAGCATGGACCAGCAAGTTTATCATCACCTACAGTTACCAATTCATCTTCTCGGAAACATGGATCGACAGGGTTAACATCACCTACCAATTGTAAGTTTTCTGTAAACCTTGGAAAGGGGAGTGCTATGAAGTTCTCTCCTGCATCCAAGAGACGACGTAGATCACCATTTATCGAGTCAGTTAATTAA 2247 0.3952 MTKDTPESSGGAFHTVHAERDLQSNWEVDLAKKLEEYLLKICSGEITGEDEGNIHVNFAEAALLLQGSIQVYSRKVEYLYNLVLRTLEFLSQKRQADQVDGESVQPEEAGPSAVADEENDQFWGFDDIPVDEKNSLDSSTGKDVNLDQFIKPPANLVVLEGDCLDTGGDGGELESYLLSTTDLYQDFILLDTSDAVAVHEFLKGQNAGATHCGTNRATSIRKSFLSPRRSGGSAHKSVAKSQRANSVFSPKNISFEDQNARPSSPTSAGFDSGNFGPNMDDGFDAPIDTDNSDEDDDDPWIPLNPHEPGNLRVKPFRKVKVSKKVRINVRPRVSMTTLFPLAKLHGPISPELTKMWEMRRCAHQRQKDSESSPPLYEKLRQSLINGENETDEPFLNTEDNNVNDDNEFDNGNSDFDMPGNDFMDEDLHPFNQEHGVDDVDAHADEAVDLEFPDSQTSLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIEHNLEEQESHPPFDIRDYGERILDKLSLEESGSSVMPFSDLVTGQVKYDVSRSFSSLLQLVNNGEVDLQRHDVAGESFCYTSVYPFHVKLLKHHKKKEVAKQFGISKKRAKSPIKKPSPNGEKKTRREKSPTRKPSPKEDEKKKTRREKSPISSSSRNHRSTSLSSPINTRSSSRKHGPAGLSSPTNTGSSYRKHGPASLSSPTVTNSSSRKHGSTGLTSPTNCKFSVNLGKGSAMKFSPASKRRRRSPFIESVN 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01816 748 MobiDBLite consensus disorder prediction 97 116 - -
Tsu07g01816 748 MobiDBLite consensus disorder prediction 286 300 - -
Tsu07g01816 748 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 151 298 IPR031719 -
Tsu07g01816 748 MobiDBLite consensus disorder prediction 608 647 - -
Tsu07g01816 748 MobiDBLite consensus disorder prediction 235 273 - -
Tsu07g01816 748 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 299 591 IPR031737 -
Tsu07g01816 748 MobiDBLite consensus disorder prediction 594 748 - -
Tsu07g01816 748 MobiDBLite consensus disorder prediction 648 722 - -
Tsu07g01816 748 MobiDBLite consensus disorder prediction 220 311 - -
Tsu07g01816 748 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 7 741 IPR031739 GO:0030261
Tsu07g01816 748 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 14 128 IPR009378 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01816 K11490 - gmx:100786571 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01816 07 18063863 18069545 Tsu07g01816 07 18063863 18069545 ECH