Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01795 ATGGTAGTATCAACCTTCACAAATGATTATTCTTCCCCTATTGCTCCATCACGTATATTCAAGGCCTTAATCACTGACTCTAGCAATTTACTTCCAAAACTCTTACCTCAGTTCATAAAAGATGTTAACTTAATCCAAGGAAATGGTGAAGCTGGAACCATTGAACAAGTTAACTTTGCTGAAGCTAGTCCATTCAAATATCTAAAAAATAGGATTGATATGATTGATAATGATAAATTGGTATGCAACTACACAATGATTGAAGGAGATCCATTAGGTGATAAGCTTGAGTCAATAGCTTATGAGGTTAAGTTTGAGGCCATTAGTGAGGGAGGTTGTCTTTGTAAAATGACAAGTATATACAATGCTATTGGAGAGTTTGAAGTCAAAGAAGAAGAGGTAAAGGAAGGAAGGGAAAGCTCTATTGGAATTTGCAAAGTTGTGGAAGCATACTTGATGGAGAATCCACAagtttatgcttaa 483 0.3478 MVVSTFTNDYSSPIAPSRIFKALITDSSNLLPKLLPQFIKDVNLIQGNGEAGTIEQVNFAEASPFKYLKNRIDMIDNDKLVCNYTMIEGDPLGDKLESIAYEVKFEAISEGGCLCKMTSIYNAIGEFEVKEEEVKEGRESSIGICKVVEAYLMENPQVYA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01795 160 SUPERFAMILY Bet v1-like 5 159 - -
Tsu07g01795 160 CDD Bet_v1-like 5 152 - -
Tsu07g01795 160 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01795 160 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01795 160 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01795 160 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01795 160 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01795 160 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01795 160 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01795 160 PANTHER - 1 160 - -
Tsu07g01795 160 Gene3D - 1 160 IPR023393 -
Tsu07g01795 160 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Tsu07g01795 160 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01795 Tsu-Chr7 17763415 17764215 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01795 - - gmx:100306656 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01795 07 17763415 17764215 Tsu07g01795 07 17763415 17764215 ECH