Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01787 ATGGGTGTTTTAAATTTTGAGGATGAGACAACTTCCATTGTAGCTCCTGCTAGACTTTACAAAGCTCTAGTTACAGATGCTGATATCCTTACCCCAAAAGTTATTCCTGATATTAAGACTGTTGAAATTGTTGAAGGAAATGGTGGTGCTGGATCTATCAAGAAACTCACTTACGTTGAAGATGGTGAAACCAAGCATGTGTTGCACAAAGTGGATTTAGTAGATGATGTTAACTTTTTTTACAACTACAGCATAGTTGGAGGTGATGGGCTTCCAGACACAGTTGAGAAAATTTCATTTGAGGCTAAATTATCTGCAGGCCCAAATGGAGGAACCATTGCAAAGTTGAGTATAAAATACTTCACCAAAGGTGATGTTAATCCTAGTGAAGAGGAACTCAAGAGTGGCAAAGCTAAGGGTGATGGTCTTTTCAAGGCTCTTGAGGGTTATGTTTTGGCTAATCCTGATTACTAA 474 0.3861 MGVLNFEDETTSIVAPARLYKALVTDADILTPKVIPDIKTVEIVEGNGGAGSIKKLTYVEDGETKHVLHKVDLVDDVNFFYNYSIVGGDGLPDTVEKISFEAKLSAGPNGGTIAKLSIKYFTKGDVNPSEEELKSGKAKGDGLFKALEGYVLANPDY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01787 157 PANTHER ABA-RESPONSIVE PROTEIN 1 157 - -
Tsu07g01787 157 Pfam Pathogenesis-related protein Bet v 1 family 1 154 IPR000916 GO:0006952
Tsu07g01787 157 CDD Bet_v1-like 6 151 - -
Tsu07g01787 157 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01787 157 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01787 157 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01787 157 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01787 157 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01787 157 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01787 157 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Tsu07g01787 157 Gene3D - 2 157 IPR023393 -
Tsu07g01787 157 PANTHER - 1 157 - -
Tsu07g01787 157 SUPERFAMILY Bet v1-like 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01787 Tsu-Chr7 17665289 17667189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01787 - - gmx:100500525 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01787 07 17665289 17667189 Tsu07g01787 07 17665289 17667189 ECH