Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01766 ATGGGCtcttacaaaaaattaataactttcatgttattaatttttatggTGGTAACATTAAGTGAAGGAAGAGTACCCTTTGCATGTGACCCAAATAATGGTTTAACAAGAGGGTATAGATTTTGCAATACAAGAGTGCCAATTCATGTTAGAGTACAAGACCTTATAGGAAGACTTACATTGCCTGAAAAGATAAGGCTTGTTGTGAACAATGCAATTGCTGTTCCAAGACTTGGAATACAAGGCTACGAGTGGTGGTCGGAAGCTTTACACGGCGTTTCTAATGTGGGCCCGGGTACTAAATTTGGTTCGGCCTTCCACGCCGCCACTAGCTTCCCTCAAGTTATCACCACTGCTGCTTCTTTCAATCAATCTTTGTGGCTTGAAATTGGTCGGATTGTGTCCGATGAAGCAAGAGCAATGTACAATGGTGGATCAGCTGGATTGACATTTTGGAGTCCTAATGTGAATATTTTCCGTGACCCACGATGGGGCCGTGGCCAGGAGACACCGGGCGAAGACCCCACCTTGTCTGCGAAATATGCCGCCAGCTATGTTCAAGGGCTACAAGGCAACGGCGCGGGTAACAGCCTCAAGGTTGCCGCTTGTTGTAAACATTACACTGCCTATGATCTTGATAATTGGAATGGTGTTGATAGATTTCATTTCAATGCCAAGGTGAGTAAACAGGACTTGGCGGACACATACGATGTACCATTCAAAGCGTGTGTGTCGGAAGGAAAGGTGGCAAGTGTAATGTGTTCCTACAATCAGGTCAATGGCAAGCCCACTTGTGCTGATCCTGAACTCCTTCGCGACACCATTCGCGGTGAATGGGGCCTCAATGGgTACATTGTATCGGACTGTGATTCAGTTGGAGTTTACTACGACACCCAACACTACACGAGAACACCTGAAGAGGCAGCAGCAGCCGCAATTAAAGCGGGTCTAGATTTGGACTGTGGTCCATTTTTAGCCCTACATACTGATGGTGCTATTAAGCAAGGGCTTATGTCTGAAAATGATCTTAATCTTGCTTTAGCTAACCTCATTACCGTCCAAATGAGATTGGGTATGTTTGATGGGCCGGCCCAACCATATGGAAACTTAGGAACAAATATTGTTTGTTTGCCGGCCCATAATGAAGTTGCAGTTGAGGCAGCTAGACAGGGTATTGTTCTCCTACAAAACAAAGGAAATGCATTGCCATTGAACCCTACACGTTACCGCACCGTAGGAGTCATTGGACCTAATTCTGATGTTACTGAAACTATGATAGGGAACTATGCTGGTGTGGCGTGTGGTTATACGACGCCGTTGCAAGGGATTGCAAGATATGTGAGAACCCTCCATCAAGTAGGATGTAGCAACGTTGCTTGTGGAGGGAACCAACTATTTGGGGCGGCTGAGACAGTAGCAAGACAAGCTGACGCGACAGTATTAGTAATGGGCCTAGATCAATCCATAGAAGCAGAATTTAGAGACAGAGTTGGGCTTCTTTTACCAGGCCACCAACAAGAGCTAGTGTCTAGAGTAGCTAGGGCTGCTAGAGGCCCAGTTATCTTGGTACTCATGTCTGGTGGGCCTATTGATGTTACATTTGCCAAAAATGATCCCAAGATTAGTGCCATTTTGTGGGCTGGTTATCCTGGTCAATCTGGTGGTACTGCCCTTGCTGATATCATCTTTGGTAGAACTAATCCaggtaagaaaaaaaaaactaaattgattaattttttcttcattttttttgggtCCAATAGTGATTCTTTCGATAATGTGAGCTAA 1788 0.4351 MGSYKKLITFMLLIFMVVTLSEGRVPFACDPNNGLTRGYRFCNTRVPIHVRVQDLIGRLTLPEKIRLVVNNAIAVPRLGIQGYEWWSEALHGVSNVGPGTKFGSAFHAATSFPQVITTAASFNQSLWLEIGRIVSDEARAMYNGGSAGLTFWSPNVNIFRDPRWGRGQETPGEDPTLSAKYAASYVQGLQGNGAGNSLKVAACCKHYTAYDLDNWNGVDRFHFNAKVSKQDLADTYDVPFKACVSEGKVASVMCSYNQVNGKPTCADPELLRDTIRGEWGLNGYIVSDCDSVGVYYDTQHYTRTPEEAAAAAIKAGLDLDCGPFLALHTDGAIKQGLMSENDLNLALANLITVQMRLGMFDGPAQPYGNLGTNIVCLPAHNEVAVEAARQGIVLLQNKGNALPLNPTRYRTVGVIGPNSDVTETMIGNYAGVACGYTTPLQGIARYVRTLHQVGCSNVACGGNQLFGAAETVARQADATVLVMGLDQSIEAEFRDRVGLLLPGHQQELVSRVARAARGPVILVLMSGGPIDVTFAKNDPKISAILWAGYPGQSGGTALADIIFGRTNPGKKKKTKLINFFFIFFGSNSDSFDNVS 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01766 595 Gene3D - 377 574 IPR036881 GO:0004553|GO:0005975
Tsu07g01766 595 Gene3D - 51 368 IPR036962 GO:0004553|GO:0005975
Tsu07g01766 595 Pfam Glycosyl hydrolase family 3 N terminal domain 104 322 IPR001764 GO:0004553|GO:0005975
Tsu07g01766 595 PRINTS Glycosyl hydrolase family 3 signature 112 131 IPR001764 GO:0004553|GO:0005975
Tsu07g01766 595 PRINTS Glycosyl hydrolase family 3 signature 274 292 IPR001764 GO:0004553|GO:0005975
Tsu07g01766 595 PRINTS Glycosyl hydrolase family 3 signature 200 216 IPR001764 GO:0004553|GO:0005975
Tsu07g01766 595 Pfam Glycosyl hydrolase family 3 C-terminal domain 392 569 IPR002772 GO:0004553|GO:0005975
Tsu07g01766 595 SUPERFAMILY (Trans)glycosidases 40 391 IPR017853 -
Tsu07g01766 595 PANTHER BETA-D-XYLOSIDASE 1 7 571 - -
Tsu07g01766 595 PANTHER SUGAR HYDROLASE-RELATED 7 571 IPR044993 GO:0009044|GO:0045493
Tsu07g01766 595 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 392 569 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01766 Tsu-Chr7 17427392 17435269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01766 6 571 Glycoside Hydrolase AT5G49360 77.072 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01766 - - lja:Lj6g3v1538130.1 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01766 07 17427392 17435269 Tsu07g01766 07 17427392 17435269 ECH