Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01765 atgaattcCAAATGGATTTTTTTCCTATTAACAATTTCAACGATATTAGCAATAACAAATTCAGAAACAGTGAAACCATTAGTGAAAATAGTCAAAGGAAAGAAACTATGTGACAAAGGTTGGGAATGTAAAGGTTGGTCAGTGTATTGTTGCAATGAAACAATTTCtgattatttacaaacatatcAATTTGAGAATTTGTTCTCAAAGAGAAATGATCCTGTAGCACATGCTGTTGGATTTTGGGATTATCGTTCTTTTATTACTGCTGCTGCACTTTATGAGCCTCTTGGATTTGGTACTTCTGGTGGAAAACATGGTGGACAAAAAGAAGTTGCTGCTTTTCTTGGTCATGTTGGAAGCAAAACTTCTTGTGGTTATGGAGTGGCTACAGGGGGACCCTTTGCTTGGGGCTTATGCTATAATAAGGAATTAAGTCCTGACAAATTCTACTGTGATGAATACTACAAATTAACCTATCCATGTAGTCCTGGTGCAGCATACTATGGCCGTGGTGCCATACCAATTTACtgGAATTACAATTATGGAAAAATTGGAGAAGCATTAAAAGTGGATCTATTAAACCATCCAGAATACATAGAGCAAAATGCAACATTAGCATTCCAAGCAGCATTATGGAAATGGATGACACCACCTGAAAAACACATACCTTCACCACATGATGTTTTTGTTGGAAATTGGAAACCAACAAAAAATGACACATTATCCAAAAGAGTACCTGGATTTGGTGCcacaattaatattttatatggtGATCAAGTTTGTGGCCAAGGTTCTGAAAATGACTCAATGAATAATATAATTTCTCATTATCTTTATTATCTTGATTTACTAGGAGTTGGTAGAGAAGAGGCAGGGCCTAATGAAATTCTATCTTGTGCTGAACAAGCTGCTTTTAAACCTTCTGGCTCACCTTCTTCTTCAACAACTTGA 954 0.347 MNSKWIFFLLTISTILAITNSETVKPLVKIVKGKKLCDKGWECKGWSVYCCNETISDYLQTYQFENLFSKRNDPVAHAVGFWDYRSFITAAALYEPLGFGTSGGKHGGQKEVAAFLGHVGSKTSCGYGVATGGPFAWGLCYNKELSPDKFYCDEYYKLTYPCSPGAAYYGRGAIPIYWNYNYGKIGEALKVDLLNHPEYIEQNATLAFQAALWKWMTPPEKHIPSPHDVFVGNWKPTKNDTLSKRVPGFGATINILYGDQVCGQGSENDSMNNIISHYLYYLDLLGVGREEAGPNEILSCAEQAAFKPSGSPSSSTT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01765 317 Gene3D Endochitinase, domain 2 143 202 - -
Tsu07g01765 317 Gene3D - 63 306 - -
Tsu07g01765 317 PANTHER CHITINASE-RELATED 17 309 - -
Tsu07g01765 317 PIRSF Endochitinase 2 307 IPR016283 GO:0004568|GO:0005975
Tsu07g01765 317 PANTHER CHITINASE-RELATED 9 310 - -
Tsu07g01765 317 Pfam Chitinase class I 62 290 IPR000726 GO:0004568|GO:0006032|GO:0016998
Tsu07g01765 317 PANTHER - 17 309 - -
Tsu07g01765 317 SUPERFAMILY Lysozyme-like 55 306 IPR023346 -
Tsu07g01765 317 PANTHER CHITINASE-LIKE PROTEIN 1 9 310 - -
Tsu07g01765 317 CDD chitinase_GH19 63 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01765 Tsu-Chr7 17393196 17395870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01765 20 306 Glycoside Hydrolase AT3G16920 80.836 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01765 - - gmx:100809617 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01765 07 17393196 17395870 Tsu07g01765 07 17393196 17395870 ECH