Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01746 ATGGCTTCTTTCTTTGCTAGAACCAAGAGGTTCTCTTTGGGCACTCCACTGTTTCTATTGGGATTATTCACAATAAACCTTATTCCCATGGCAGATGCTCAAATAGGTGTATGTTATGGTATGATGGGAAACAATTTACCACCTGCAAATGAAGTCATAGATCTCTACAAAGCAAACAACATTAAGAGATTGAGACTTTATGATCCAAATCAAAATGCTCTAAATGCATTAAAAAATTCAGGCATTGAAGTCATGCTTGGTGTGCCAAATTCTGACCTTCAAGGCTTAGCTACAAATGCTGATAATGCACGTAATTGGGTACAAAAAAATGTGTTGAATTTTTGGCCTAGTGTCAAATTCAAGCTTATTGCAGTTGGTAATGAAGTGAGTCCTGTTGGAGGCTCTTCTTGGGCAGCCCAATATGTTTTACCTGCAACCCAAAACATATACCAAGCAATAAGAGCCCAAGGTCTTCAAGATCAAATCAAGGTTTCAACTGCTATTGACACGACCCTTATCGGAACCTCTTTCCCACCGTCTAAAGGTTCTTTCAGGGGTGACGTGAGGGCATACCTAGACCCTATTATTGGGTACTTGGTATATGCAGGTGCGCCATTACTTGTCAATCTTTATCCTTATTTTAGTTATGCAGGTAACCCACGTGACATATCACTTCCTTATGCTCTTTTCACCTCCCCGAATGTTATGGTACAAGATGGCCAATATGGGTACCAAAATTTGTTTGATGCTATGTTGGATTCAGTGTTTGCAGCCTTAGATAACACTGGAATTGGTTGGGTGAATATTGTTGTATCTGAAACTGGTTGGCCCTCAGACGGAGGGGCTGGTACTTCATATGATAATGCGCGTATTTACCTTGATAATTTGATTCGTCATGTTGGAAAGGGTACTCCCAGAAGGCCTTGGGCTGTAGACACTTATATATTTGCTATGTTTGATGAGAATCAAAAGAGTCCTGAATTGGAGAAACATTTTGGTGTGTTTTATCCCAATAAACAAAAGAAGTACCCATTTGGATTTGGAGGAGAAAGGAGGAATGGGAAAATTCTGGATGGTGACTTCAATGCAACAACTTCTCTTAAGAGTGACATGTAA 1116 0.3996 MASFFARTKRFSLGTPLFLLGLFTINLIPMADAQIGVCYGMMGNNLPPANEVIDLYKANNIKRLRLYDPNQNALNALKNSGIEVMLGVPNSDLQGLATNADNARNWVQKNVLNFWPSVKFKLIAVGNEVSPVGGSSWAAQYVLPATQNIYQAIRAQGLQDQIKVSTAIDTTLIGTSFPPSKGSFRGDVRAYLDPIIGYLVYAGAPLLVNLYPYFSYAGNPRDISLPYALFTSPNVMVQDGQYGYQNLFDAMLDSVFAALDNTGIGWVNIVVSETGWPSDGGAGTSYDNARIYLDNLIRHVGKGTPRRPWAVDTYIFAMFDENQKSPELEKHFGVFYPNKQKKYPFGFGGERRNGKILDGDFNATTSLKSDM 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01746 371 Pfam Glycosyl hydrolases family 17 35 345 IPR000490 GO:0004553|GO:0005975
Tsu07g01746 371 SUPERFAMILY (Trans)glycosidases 35 346 IPR017853 -
Tsu07g01746 371 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 25 354 - -
Tsu07g01746 371 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 25 354 IPR044965 GO:0004553|GO:0005975
Tsu07g01746 371 Gene3D Glycosidases 34 348 - -
Tsu07g01746 371 ProSitePatterns Glycosyl hydrolases family 17 signature. 267 280 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01746 Tsu-Chr7 17170948 17173960 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01746 41 351 Glycoside Hydrolase AT4G16260 61.783 1.32e-138 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01746 - - ccaj:109791097 593.578