Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01679 ATGCCTATGGAGACACTATTCCATCGTTCATCATATCTAAAACCTTCTTATCTCTTACCTAAACCTCCAAAAAACCCTATCATGTTATCATCAAATTCTCTTAGATTCAACTTTAATTACTTCCCAAATTCCcatctttcttcttcattatCATCATTTTCTGGCCAATTTTCTCTTCAAAATAACCCCACAAAATCATTACCACTTATTCTCAATGCTGGTAAAAAAGATAGTCATAGTTTTGTACCCAAATCAGATGAAGGGTTTTTCCCTGAATCTGTTCTTCTTAAAAAGAAGGAAGTTGAGGAAGATGGTAAGCTTCTTCCGAAGTTTGAAGATGCTGATGAAAGAGAACTCTATGAATCGCTGAAGCTTGACGTGGAAACTGATATGGACGTCGACCGATTGCGCCACTACGAGATTGTTTACTTAATTCACGAGAAATTTGCAGAAGAGGTTGCAGCTGTCAATGAAAAAGTTCAAGACTTTTTGAGGGAGAAGAAAGGAAGAGTGTGGAGATTCAATGATTGGGGTATGAGAAGGTTGGCTTACAAAATACAGAAAGCTGCTAACGCGCACTATATTTTGATGAACTTTGAGTTGGACGCCAAATATACCGACGAGTTCAAGATTATGTTGGACAGAGATGAAAGAGTCATTCGGTATCTGGTGACGACGACGGACGAGGCAATCACTGAAGATTGCCCTCCCCCTCCTGAATATCATACTCTTGAAGATGTAGACGACGAAGAATgggatgatgaagatgatgaagacgaCGAAGAATGGGATGATGAAGACGACGAGGAGGACgacaatgatgatgatgaggatgatgatgatgaagaagttgatgatgatggttttgatgatgatgatattgagGGTGGTGAGGGGATTTTCATAatttttaaatttttattgctaattaatttttattgtatgaatttttattgtagAGCAATAAAGAGCACGGTAAAAGGGTTCCCCAGGCCTACGCTAGATCTAAGCACATTATCATTTGCCAAGGTGATGGATAGTGCCTTTGAACATCCTTTGCACCCTCCTTTTGATCCATATGCAAATGATGTCAACTTTCTTCTTGCATCTTATGTGATTCCTTATGTTGGTCTTACCGGCTATGTTGGAGCTAATCCACTCTTGCAAAATGCTACTTCTAGGAAGCTAGTTGCAGGCCTTCTAGGAGTAGAATCAGGCCAAGATGCAGTTATACGAGCGTTGTTATATGAACGTCGAGCATGGAAGGTGCATCCTTATGAAGTAAGCGTGGCAGAGTTCACCAATCGCATTTCAATGCTTAGGAATAAATTAGGAAATGATGGTGTGAAAGATGAGGGTTTTGTGGAAGACTCCTCGGGCAATATCCTTGCCGGTGATAAAGACTCGCTATCATATACAAGGACTCCAGAGGAAATATTGAAGATTGTATATGGAACGGGTGATGAAAGTATCCCTGGTGGCTTCTACCCTCTTGGAGGAGATGGCCATATAGCAAAATCTTACTTATCCAATACTTAA 1539 0.3671 MPMETLFHRSSYLKPSYLLPKPPKNPIMLSSNSLRFNFNYFPNSHLSSSLSSFSGQFSLQNNPTKSLPLILNAGKKDSHSFVPKSDEGFFPESVLLKKKEVEEDGKLLPKFEDADERELYESLKLDVETDMDVDRLRHYEIVYLIHEKFAEEVAAVNEKVQDFLREKKGRVWRFNDWGMRRLAYKIQKAANAHYILMNFELDAKYTDEFKIMLDRDERVIRYLVTTTDEAITEDCPPPPEYHTLEDVDDEEWDDEDDEDDEEWDDEDDEEDDNDDDEDDDDEEVDDDGFDDDDIEGGEGIFIIFKFLLLINFYCMNFYCRAIKSTVKGFPRPTLDLSTLSFAKVMDSAFEHPLHPPFDPYANDVNFLLASYVIPYVGLTGYVGANPLLQNATSRKLVAGLLGVESGQDAVIRALLYERRAWKVHPYEVSVAEFTNRISMLRNKLGNDGVKDEGFVEDSSGNILAGDKDSLSYTRTPEEILKIVYGTGDESIPGGFYPLGGDGHIAKSYLSNT 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01679 512 CDD bS6 138 225 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tsu07g01679 512 Hamap 30S ribosomal protein S6 [rpsF]. 136 229 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tsu07g01679 512 Pfam Ferritin-like domain 319 417 - -
Tsu07g01679 512 PANTHER DESICCATION-LIKE PROTEIN 320 509 - -
Tsu07g01679 512 Coils Coil 146 166 - -
Tsu07g01679 512 PANTHER DESICCATION-LIKE PROTEIN 320 509 - -
Tsu07g01679 512 MobiDBLite consensus disorder prediction 230 293 - -
Tsu07g01679 512 MobiDBLite consensus disorder prediction 244 293 - -
Tsu07g01679 512 Gene3D - 132 234 IPR014717 -
Tsu07g01679 512 SUPERFAMILY ARM repeat 241 294 IPR016024 -
Tsu07g01679 512 Pfam Ribosomal protein S6 138 225 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tsu07g01679 512 SUPERFAMILY Ribosomal protein S6 136 236 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Tsu07g01679 512 TIGRFAM S6: ribosomal protein bS6 137 228 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01679 Tsu-Chr7 16048878 16069328 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01679 - - gmx:100790652 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01679 07 16048878 16069328 Tsu07g01679 07 16048878 16069328 ECH