Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01677 ATGGAAAAATTAGGAGACGGGATTTTTCCAGATGAGGTTGTTATGCAGATTCTTGCAAGATTACCAGTGAAATCGCTTTTTAGGAGCAAAACTGTGTGCAAATTATGGTATAAGTTGACTTTGGATAAGTAttttattcaattatataatGATATTTCTAGGAAGAACCCTATGATACTTGTTGAGATTTCAGATTCATTGTTAGAGTGCAAATCTAGCTTAATTTGTGTTGATAATTTAAGGGGTGTCTTTGAATTTTCGCTGAATTTCTTGAACGATAGAGTTAAGGTTCGCGCGTCATGTAATGGATTATTGTGTTGTTCTAGTATACCTGATATGGGTGTGTACTATGTTTGTAATCCGGTTACTCGCGAGTTTAGGTTGCTTCCTAAGAGTAGGGAAAGGCCAGTGACTCGGTTTTATCCTGATGGTGAAGCTACCTTAGTTGGGTTAGCTTGTGATCCGGCGTTTCAGAAGTTTAATGTTGTTCTTGCTGGTAGTCATCGTACTTTTGGGCATAGGCCGGATGGGAAGTTTATATGTTTGGTGTTTGATTCGGAGTTGAATAAGTGGAGGAAGTTGATTTCTTTTCAAGATGAACATTTTACTCATATGAATAAGAATCAAGTTGTTTTTGTCAATAATGCTTTGCATTGGTTGACTGTTAGCTCGAGTTATATACTTGTGCTTGATTTAAGTTGCGATATTTGGAAGAAGATGTCGTTGCCGTATGACCCAATTTATGGAGCGGGAAATAGGACTTATCTATTGGAGTTGGATGGTTGTCTTTCTGTTATTCAAATTTCGGAAGCGTGGATGATTATATGGGTGCTGAAAGATTACTGGAAAGATGAGTGGTGCGTCGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTGCCGGGGATTTTCCCGATCAGTCAGACAAGTGAATATGTTTTCTTGGCAACTCATAAGCAGGTTTTGGTGTATCATCGCAGAAGCCAAGTTTGGAAAGAAATGTACTCTGTGAAGTATAGCTCAACACTCCCATTATGGTTTTCAGCACATGCGTATCGCAGCACAATGTTCTCGTGTAACTGA 1086 0.3877 MEKLGDGIFPDEVVMQILARLPVKSLFRSKTVCKLWYKLTLDKYFIQLYNDISRKNPMILVEISDSLLECKSSLICVDNLRGVFEFSLNFLNDRVKVRASCNGLLCCSSIPDMGVYYVCNPVTREFRLLPKSRERPVTRFYPDGEATLVGLACDPAFQKFNVVLAGSHRTFGHRPDGKFICLVFDSELNKWRKLISFQDEHFTHMNKNQVVFVNNALHWLTVSSSYILVLDLSCDIWKKMSLPYDPIYGAGNRTYLLELDGCLSVIQISEAWMIIWVLKDYWKDEWCVVDKVSLRCIRGMVPGIFPISQTSEYVFLATHKQVLVYHRRSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01677 361 TIGRFAM F_box_assoc_1: F-box protein interaction domain 100 325 IPR017451 -
Tsu07g01677 361 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 7 359 - -
Tsu07g01677 361 SMART fbox_2 9 49 IPR001810 GO:0005515
Tsu07g01677 361 ProSiteProfiles F-box domain profile. 3 52 IPR001810 GO:0005515
Tsu07g01677 361 Gene3D - 9 45 - -
Tsu07g01677 361 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 7 359 - -
Tsu07g01677 361 Pfam F-box-like 10 43 IPR001810 GO:0005515
Tsu07g01677 361 SUPERFAMILY F-box domain 9 58 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01677 Tsu-Chr7 16035932 16037658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01677 - - gmx:100811223 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01677 07 16035932 16037658 Tsu07g01677 07 16035932 16037658 ECH