Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01365 ATGGTGTTGTTACCAATTTTACACATGACCCTTTTGCTATTAATCATCTATCAAACCACAATTGCTTCAGCTATTGTTGATCCCACACAAGGGTTCACCCCTGTTTCATTAGGCAACtcaaattttgttattcaaaagCCTTACGATGTTCAAGTAAACCAACGTTACAGTTGTACAAATGGAGTGCACCAATTTTGGGTGTATCCCACGGACAAGCCTTTTAAGAATGACACCAATACTAAGCCACGAACCGAGATTCGTATCAGTGGATATGATTATACATGTGGTATATGGCAATTTGAAGGGTATGGATATGTTCCGAGTGGCACAAGTGGGGTGTGTATTATGCAAGTGTTCGGAGGAAGTCCTTATGCGACAACTGCAATGCTTAAGATCTACGATGGTTCACTTAAATATTACGAGTCTCCAGTTCTAACTCCAAATATCTATAATAGGTGGTTCAAAGTGAACGCAATTCATGATGTTGGTGCTAACAATGTTAAGATTTATGTCGATGGGGTTCTCGAGTATGATGGAGCAGGTCGTGGTGCCAACACTCACTACTTCAAATTTGGGGTGTACTTGCAGAACAATCCTTCCAACCGTACGGAATCTCGTTGGAAGGAtattaaagtttttaaaaaataa 648 0.3889 MVLLPILHMTLLLLIIYQTTIASAIVDPTQGFTPVSLGNSNFVIQKPYDVQVNQRYSCTNGVHQFWVYPTDKPFKNDTNTKPRTEIRISGYDYTCGIWQFEGYGYVPSGTSGVCIMQVFGGSPYATTAMLKIYDGSLKYYESPVLTPNIYNRWFKVNAIHDVGANNVKIYVDGVLEYDGAGRGANTHYFKFGVYLQNNPSNRTESRWKDIKVFKK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01365 215 PANTHER ALGINATE LYASE 6 215 - -
Tsu07g01365 215 Gene3D - 46 214 - -
Tsu07g01365 215 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 6 215 - -
Tsu07g01365 215 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 202 IPR013320 -
Tsu07g01365 215 Pfam Alginate lyase 40 213 IPR014895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01365 Tsu-Chr7 12027158 12027949 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01365 - - gmx:547636 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01365 07 12027158 12027949 Tsu07g01365 07 12027158 12027949 ECH