Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01349 ATGGCATCTTCTCATACTCATACTGAAGCTgcaaaaacagaacaaataaTCATAGAATTCTTCGCTAAAAGTCTTCATATAATAATCGAATCAAGATCACTTTCTGCTTCATCACGTAATTTCAGTACTCTTTCTTCAccatcttcaacttcttcttcatcatcatcaagtgTTCGTCCTAGAGATAAATGGTTCAATCTAGCACTCAGAGAATGTCCTACAGCACTAGAAAACGCAGACTTATGGCGTCACAATAATCTTCAaccaattgttgttgatattgtTTTGATCCATAGAACCCACCACCAAAATCTTAGTTTTTCTCCAAAGGTTCGATCTTTTTTAAAAGATCGAAACCCCTTTGAAGAATTAGGAGTTGGGTCTTCACACAATTCACAGAATGAGAAGATTGTTGAAAGATGGGTGATTCAATATGAAAGCAGAAAAATTAGGGATTGTTCTAATTCAAATGCTACTAGAAGATCAAGTAATACTTTTTTGCAAAATTTGTATAAGAAATCTACTTTACTTTTAAGATCTTTGTATGCTACTGTTAGAATTTTACCTGCTTATAAGATTTACAAGGAACTTAATTCATGTGCAAATGTTTCTGCTTTTACACTTGTGCATCGTGTTTCGACTTTTTTTGAACCGTTTACTACTAAACAAGTGTCTGAAATGCTGAAATTTGTGTTTACTCCTGTGGATACTTCTTCTGGTAGACTATGTTTATCGGTATTGTATCGTCCGTGTGTTTCTGATGTGAGTTCTGAACCTTCAACTCCTTTGTCACCACAAGTTATAACTGATTATGTTGGTAGTCCTATGACTGATCGGTTGATAAGGTTTCCGTCGCTTCCTGTAGTTAGGTTTCCATCACAATCACATGGCTCTTCTCCGTCATCATTGCCATTTTCGAGGAGACATAGTTGGAGTTATGAAAATGGTGGAGCCTCGCCTCCTTCGGTTAATTATTATTCACCTTCGCCTACACATTCGGAATCACACACATTGGTTTCTAATGCTAGCTCTCCGTATTGTTATCTGCCCTCTAGTTTGCCTCCTCATCCAAGTGAAATGTCTTTGCTTCATAAGAAGAATGTGAATTTCGATGAGTACTATCCCTCGCCGAATTTCTCTCCGTCTCCCTCTACTTCTTCATCATCTCCAATCTATAGTTTGGAGTCATTAGCTTCAAAAACACTTTTACGCTCAGAAAGTGCTCCAGTAAACATACCTAATGCTGAAGTTGCTAATTCCCCTGGACATACTAGTAGGCATAATTTGCCTCCATCCACTCCCATTAGAATTTCGAGGTGTACTTCTGAGACAGATAGAAGTAGAAATCTTATGCAATCTTGCTCAACAACTGAGAAGCTGTTTTCTCTCGGAAAAGACGAGTCTCGAAAGTATTCTGGAGTCAAGATAGCACCTAACGGCTCGCCACAAGTTTCATTTTCCAGGAGCTCTAGCAGGTCTTATCAGGATGATTTTGATGAGACTGATTTTACTTGTccttttgatgttgatgatgacgATACAACAGATCCAGGCAGCAGGTAA 1563 0.3602 MASSHTHTEAAKTEQIIIEFFAKSLHIIIESRSLSASSRNFSTLSSPSSTSSSSSSSVRPRDKWFNLALRECPTALENADLWRHNNLQPIVVDIVLIHRTHHQNLSFSPKVRSFLKDRNPFEELGVGSSHNSQNEKIVERWVIQYESRKIRDCSNSNATRRSSNTFLQNLYKKSTLLLRSLYATVRILPAYKIYKELNSCANVSAFTLVHRVSTFFEPFTTKQVSEMLKFVFTPVDTSSGRLCLSVLYRPCVSDVSSEPSTPLSPQVITDYVGSPMTDRLIRFPSLPVVRFPSQSHGSSPSSLPFSRRHSWSYENGGASPPSVNYYSPSPTHSESHTLVSNASSPYCYLPSSLPPHPSEMSLLHKKNVNFDEYYPSPNFSPSPSTSSSSPIYSLESLASKTLLRSESAPVNIPNAEVANSPGHTSRHNLPPSTPIRISRCTSETDRSRNLMQSCSTTEKLFSLGKDESRKYSGVKIAPNGSPQVSFSRSSSRSYQDDFDETDFTCPFDVDDDDTTDPGSR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01349 520 Gene3D HORMA domain 2 254 IPR036570 -
Tsu07g01349 520 Pfam Autophagy-related protein 13 18 251 IPR018731 GO:0006914|GO:1990316
Tsu07g01349 520 PANTHER UNCHARACTERIZED 7 518 IPR040182 GO:0000045
Tsu07g01349 520 MobiDBLite consensus disorder prediction 39 59 - -
Tsu07g01349 520 MobiDBLite consensus disorder prediction 472 520 - -
Tsu07g01349 520 MobiDBLite consensus disorder prediction 478 492 - -
Tsu07g01349 520 MobiDBLite consensus disorder prediction 414 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01349 Tsu-Chr7 11886269 11888499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01349 K08331 - gmx:100798585 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01349 07 11886269 11888499 Tsu07g01349 07 11886269 11888499 ECH