Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01347 ATGGGAGCGTCAACTTCATCGGAGCCGAAGCTTTCACCGGAACAACAGGAAGCGGAAAACGTCGCATCCTCCACCGGAGCTCTTCCAATACTTCACAAAGCTTTCTCCAAATTCGCCAACTCCGAAACAAACGCAATTCCTTTAGAAAATCTACAAAAATGCTTCAGTTTCGTTCGAGAAGGTGGAAGTTACACTACCGAGAATGTGAATGATTCGTTTCCGGTTTTATTGGATCAATTAGGTTCATCTTTAGttgatcaattttttaatattgataaaGGAGGAATAAACTGGATTGAATTTGTGAAAGGTTATAACAAGTGTTGTTCTAGGGTATCAGCATCGATTTTTCTAAACAAGTTTATTAGAGTGTTTATTGATGTTGCTAAAAAAGCGAATTTGTCTACGAATTTGGAGTTTGAATCAGATGATGTTGATTGTAAGGTCAATGGATACCTTCTTCCGAATCATGTGTTTTTGTTACTTTCCATTTGTTGGGCTATGTGTTGGGATAGTAGAAATTTGAAAGGGAAAGGGAAAGGAAAATTGAGTGTGCCGGATTTGAGTCATTTGGTGTTGTCGGCGGTGACGTCGTGTGTTGATGATAAAGATGGGTTTGATGTGTGGGATTGTGAGGTTTTGAGTTTGGAAGTTGAGATTCCTGTAGGGAAGTTTGTTACTTGGGTTATCAGTACAGTGCCATGTCTCCCTGATTGCTTAAAGCTGTATTTTCATGCAAGATTGCAAATTGCAGTAGCTGAAGGGGATGAATCGACATCCTCTGATTCCCCTTCTGTTGAAGAAATTTCATCTACAACTGCATGTGATTCTATTTTAACCCAAGGAAGAGCTTGGGCAATTTCTATCACACAGAGAAGTACAATAAATGAAGAGATTTCTAGAGCCTTTATTAGCAGTGGAGCTGGAATTGATGAGAACCTTATTTATCGTTCATCCACCCATGGAAGAGGCCTCAACAGATTTTGGTCTCATGTTGAAGGTTATCACGGTCCGTTGCTAATTTTGATTGCTGCAAGTTCAGGAAATGATCATGAAGGAAATTCTGCAATCAGGAAATTTGTTGTAGGTGCCCTAACAAATGAAGGTCTTGAAAATAAAGATACCTTCTATGGAACCTCCGGTTGTTTGTATTCTTTAAGCCCGGTGTTTCATGTATTTCCACCTTCTGGTAAGGAAAAAAATTTCGTTTATAGCCACTCGCATACTACTGGAAGAGGATACCAATCACATCCAGCGCCAGTTGGAGTTGCATTTGGAGGAAGTGCGGGAAATGAGAGAATATTTATTGAtgaagatttttcaaaagtGACCATTCGCCACCATGCTGTTGACAAAACTTACCAGAGTGGTGCCCTCTTTCCAGATCAGGGTTTCCTACCTACTGAAGCTCACATTTCAGAAGTTGAAGTTTGGGGACTTGGTGGGAAAGCTGCAAAGGATGttcaaaacaaatataagaAGAGAGAAGAACTTTTCACCGATCAAAGACGAAAAATTGACCTGAAGACATTTGCAAATTGGGAGGATTCACCTGAAAAGATGATGATGGATATGATGTCTGATCCAAATGCTGCTCGAAGGGAAGAGCGTTGA 1614 0.3934 MGASTSSEPKLSPEQQEAENVASSTGALPILHKAFSKFANSETNAIPLENLQKCFSFVREGGSYTTENVNDSFPVLLDQLGSSLVDQFFNIDKGGINWIEFVKGYNKCCSRVSASIFLNKFIRVFIDVAKKANLSTNLEFESDDVDCKVNGYLLPNHVFLLLSICWAMCWDSRNLKGKGKGKLSVPDLSHLVLSAVTSCVDDKDGFDVWDCEVLSLEVEIPVGKFVTWVISTVPCLPDCLKLYFHARLQIAVAEGDESTSSDSPSVEEISSTTACDSILTQGRAWAISITQRSTINEEISRAFISSGAGIDENLIYRSSTHGRGLNRFWSHVEGYHGPLLILIAASSGNDHEGNSAIRKFVVGALTNEGLENKDTFYGTSGCLYSLSPVFHVFPPSGKEKNFVYSHSHTTGRGYQSHPAPVGVAFGGSAGNERIFIDEDFSKVTIRHHAVDKTYQSGALFPDQGFLPTEAHISEVEVWGLGGKAAKDVQNKYKKREELFTDQRRKIDLKTFANWEDSPEKMMMDMMSDPNAARREER 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01347 537 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 1 524 - -
Tsu07g01347 537 ProSiteProfiles TLDc domain profile. 285 481 IPR006571 -
Tsu07g01347 537 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 524 - -
Tsu07g01347 537 Pfam TLD 314 481 IPR006571 -
Tsu07g01347 537 SMART 109ultra 292 481 IPR006571 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01347 310 442 EF-hand Containing Proteins AT5G06260 26.471 1.37e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01347 - - gmx:100786867 813.527