Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01346 ATGGCGCCGGCGAAGAAGGGAAAAGCAAAGGTGGAGCCTAAGAAAACGGTTCCTTCGGTAAAACCTAATGATTTTCCGTCTTGTATTCGGTGTGTGGCTCCTTCTTCCGTCGCTATAACGATCCATGCTAAACCTGGTTCAAAGTCCGCTTCCGTAACAGATGTGAGCGATGAAGCTGTTGGTGTTCAGATTGATGCACCGGCGAGAGATGGTGAAGCAAATGCTGCTCTTCTTGATTACATCAGCTCTGTTTTAGGCGTAAAACGGAGACAGGTGTCTTTAGGTACTGGTTCTAAGTCAAGAGATAAGACGGTCATTGTGGAAGATGTAACTCAGCAATATGTTTTTGACGCTTTGGATAAAGTCTCAAAACAAAGTGAAGGCAGAGTACCAACTCCTTTAACTTGCCTTTATCATTTTGTTAGAGGTTTCAAGAAAACTGCTCTCTTTGCTGACAATAGGAGTGGTGTCTTGCTGTTTATATTTGGATCTGTTATCACGGCATTTGTCGCCGTTCGCCCGTTGCCTATAGGTGGCTTGGAGCGAGATCCTTAG 555 0.4486 MAPAKKGKAKVEPKKTVPSVKPNDFPSCIRCVAPSSVAITIHAKPGSKSASVTDVSDEAVGVQIDAPARDGEANAALLDYISSVLGVKRRQVSLGTGSKSRDKTVIVEDVTQQYVFDALDKVSKQSEGRVPTPLTCLYHFVRGFKKTALFADNRSGVLLFIFGSVITAFVAVRPLPIGGLERDP 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01346 184 Pfam Uncharacterised ACR, YggU family COG1872 37 108 IPR003746 -
Tsu07g01346 184 SMART DUF167_2 33 109 IPR003746 -
Tsu07g01346 184 Hamap UPF0235 protein YggU [yggU]. 33 121 IPR003746 -
Tsu07g01346 184 Gene3D - 28 126 IPR036591 -
Tsu07g01346 184 SUPERFAMILY YggU-like 27 117 IPR036591 -
Tsu07g01346 184 PANTHER OS04G0686300 PROTEIN 1 125 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01346 K09131 - gmx:100527290 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01346 07 11854327 11856351 Tsu07g01346 07 11854327 11856351 ECH