Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01336 ATGAGAGGAACAATGGGAACTTCTCCTCGTTCTGTTGAAACTAGACACCGTTTGCCTACATCCATTGAAGATTTATACAAGAGAAAAGTACAAAGAAGTAAAACAAAAGATGTAGAGAAGCCTTTCCACTTATCTATCCAAGATAGGAGCTCAagatgcaagttttcttttttaaaacttaTCTTAGTAGTAACCATTTCCGCCACTTTTGTAATGCTCCTCTACTCTCCAGAAGTTTACAATACCAGCCATTTATCAGCCTCTGGCTCAAGGTGGATATGGGGTGGCTCAGATCCTCGGTACATTTCAAATATAGATACTGATTGGGatgttataataaaaatcacaGCGAAAATGATAggaaaaaatgaatttcaagGCATCGGACTTGTAAATTTCAACAACACTGAGATTTCTAACTGGAAGCGTAATTTTCATGATGCCACACATGTTGTTCTGCATTTGGAGCATGCTGCAAACAATGTGACATGGGAGTCTCTATATCCAGAATggattgatgaagaagaagaaactgaAGTTCCTGTTTGTCCCTCTCTACCAAGTCTCGTATCTCCTGGTACAAGACTCAATCTCATTGCTGTCAAGCTTCCTTGTAGGAATGGAGACAATTGGTCTAGAGATGTTGCTCGTTTGCACCTGCAGCTTGCAGCTGCTGGACTTGCTACCTCTTTCAAAGGAAATTACCCCGTTTATGTGCTCTTCATTACCAACTGTTTTCCGATACCAAATCTGTTTACCTGCAAAGAACTAATTGGACGTGAAGGAAATGTATGGTTATACAGACCAAACTTGAGTGTTTTGAGAGAAAAGGTTCAGCTTCCAGTTGGCTCATGTGAACTTGCACTTCCTATGAGAGGCAAAGAACTGGTTTACAATGGAAATGCTCCAAGAGAAGCCTATGCAACAATTCTGCATTCAGCTCATGTTTATGTCTGTGGAGCCATAGCTGCAGCGCAAAGCATCCGGATGTCAGGATCAAGTAGAGACCTTGTAATACTTGTTGATGAGACAATCAGTGAATATCACAAAAGTGGTTTGGAAGCAGCAGGGTGGAAGGTTAGAAAAATACAGAGGATCAGAAACCCCAAAGCTGAAAAAGATGCTTACAATGAATGGAACTACAGCAAATTCAGGTTATGGCAGTTGACAGATTATGACAAGATAATATTCATTGACGCAGATTTGCTCATACTCAGAAACATAGATTTTCTATTTGGAATGCCAGAAATCACTGCTACCGGTAACAATGCCACACTTTTTAACTCGGGTGTCATGGTGGTGGAGCCATCAAACTGCACATTTCAGCTCCTGATGGATCATATTAATGAGATTGAGTCCTACAATGGAGGGGACCAAGGGTATTTGAATGAAATATTTACATGGTGGCACAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGATTGGTGACGAGGAAGagaagaaacaaatgaaaacCATGTTGTTTGGTGCTGAGCCACCAATTCTCTACGTGCTTCACTATCTAGGTTTGAAGCCATGGCTATGCTTCAGGGACTATGATTGTAACTGgaattttgatatatttcatGAGTTTGCAAGTGATGTAGCACATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTACAGCAGTTTTGCCTGTTGCCTTCAAAGCAGAAGGCACAGTTGGAGTGGGATCGGAGCCAAGCTGAAATAGCAAACTACACAGACGGGCATTGGCGAATCAAAGTTAAAGATCACCGCTTGACGAAGTGTATAGATAATCTGTGTAACTGGAAAGGCATGTTGCGGCATTGGGGGGAGAGTAACTGGACAGATGATGAGTTTTTTACTCCAACACCTCCTGCAGTTCCCACATCATCTCTTCCTGCTTTATGA 1914 0.3966 MRGTMGTSPRSVETRHRLPTSIEDLYKRKVQRSKTKDVEKPFHLSIQDRSSRCKFSFLKLILVVTISATFVMLLYSPEVYNTSHLSASGSRWIWGGSDPRYISNIDTDWDVIIKITAKMIGKNEFQGIGLVNFNNTEISNWKRNFHDATHVVLHLEHAANNVTWESLYPEWIDEEEETEVPVCPSLPSLVSPGTRLNLIAVKLPCRNGDNWSRDVARLHLQLAAAGLATSFKGNYPVYVLFITNCFPIPNLFTCKELIGREGNVWLYRPNLSVLREKVQLPVGSCELALPMRGKELVYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSSRDLVILVDETISEYHKSGLEAAGWKVRKIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTMLFGAEPPILYVLHYLGLKPWLCFRDYDCNWNFDIFHEFASDVAHAKWWKVHDAMPELLQQFCLLPSKQKAQLEWDRSQAEIANYTDGHWRIKVKDHRLTKCIDNLCNWKGMLRHWGESNWTDDEFFTPTPPAVPTSSLPAL 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01336 637 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 303 552 IPR029044 -
Tsu07g01336 637 SUPERFAMILY Nucleotide-diphospho-sugar transferases 304 550 IPR029044 -
Tsu07g01336 637 Pfam Glycosyl transferase family 8 311 517 IPR002495 GO:0016757
Tsu07g01336 637 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 20 614 - -
Tsu07g01336 637 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 614 - -
Tsu07g01336 637 CDD GT8_Glycogenin 305 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01336 Tsu-Chr7 11714526 11719003 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01336 13 636 Glycosyltransferase AT3G18660 65.683 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01336 K20890 - gmx:100780439 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01336 07 11714526 11719003 Tsu07g01336 07 11714526 11719003 ECH