LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu07g01322	ATGTCGAATCTCGAACCGGCAAATCAGATGCTAACTCGACGACCGTCGAGAAGCGCCGCAATGACCACCTTCTCGATGGAGGTTTTTGACCATGACGTTGTCGTTCCTTCATCACTAGCCTCGATTACGCCCATTCTCCGTGTAGCCAATGAGATTGAAAGCGATCGTCCAAGGGTTGCGTACCTATGTCGATTTTATGCGTTTGAAAAGGCACACCGATTGGATCAAAGTTCAAGTGGGCGTGGTGTGAGGCAGTTTAAAACACTTTTGTTGCAGCGATTGGAGAGGGACAATGCAACGAGTTTAGAGGCTCGTACTAAGAAGACAGATGCAAGGGAAATCCAAAGTTATTATCAGCAATATTATGAGAATTATGTCAAAGCACTTGATCAAGGAGAGCAAGCTGACAGAGCACAGCTTGGTAAAGCTTACCAGACTGCTGGTGTACTTTTTGAAGTGCTTTGTGCTGTTAACAAGACTGAGAAAGTCGAAGAAGTTGCTCCTGAGATTATTGCAGCTGCTAGAGATGTCCAGGAAAAGACGGAAATTTATACACCTTTTAACATTCTTCCATTGGATTCTGCCGGGGCTTCTCAGCCTATTATGCAGCTTGAAGAGATTAAGGCGGCTGTTTCTGCACTCTGGAATACTCGTGGCTTGAACTGGCCTAGTTCATTTGAGCCATCTCGCCAGAGAACAGGAGATTTGGATCTGCTTGATTGGCTCAGATCGATTTTTGGGTTCCAGAAAGACAATGTTAGGAACCAGAGAGAGCATTTGATTCTGCTTCTTGCTAACTCGCATATAAGGCTATACCCCAAACCTGAGCCTCTCAACAAGCTTGATGATCGCGCAGTTAATTCAGTGATGAATGACCTCTTTAAGAATTATAAGACGTGGTGCAAATTTTTGGGACGGAAACATAGTTTACGACTTCCTCAAGGTCCGGAAAATATACAGCAGAGGAAGTTGCTTTATATGAGCTTGTATCTTCTCATATGGGGCGAAGCGTCCAATCTTCGCTTCATGCCGGAGTGTCTATGCTACATATTTCACAATATGGCATATGAACTTCATGGTTTATTGGCCGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAACCTTCTTATGGTGGTGAAGAAGAGGCATTCTTGCGCAGGGTCGTAGCTCCCATATACAGAGTCATTCAAAcgGAAGCTGATAAGAGCAGAAATGGTACGGCTCCTCACTCAGCGTGGTGCAACTATGATGATCTAAATGAGTATTTCTGGTCACATGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTTTTTAAATCTACATTTAATTTGCAACAGGCAAGAAAAGGTGTTCTTCATCCAAAATCCACAAGAACTGGCAAATCAAATTATGTTGAGACCCGGTCATTCTGGAATCTCTTCCGCTCTTTTGATCGCCTTTGGACCTTTTATTTACTGGGTTTGCAGGCGATGTTCATAATTGCATGGGGAGATATTTCAGTGTTAGAAATGTTTCAGAAAGATGTCCTATATAAACTCTCTAGCATATTCATCACAGCAGCCATTCTTCGTTTACTTCAAAGTATCTTGGACCTGTCTCTGAATTTTCCTGTCTATCATCGCTGGAGATTCACTGATGTGCTAAGAAATATTCTCAAAGTCATTGTTAGTCTTTTTTGGGTTATTATTCTTCCACTATTCTATGTGCATTCCTTCGACGGTGCCCCAGATTTTGTCAAGCAGTTGCTTTCTTTTGTTCATCAAATGAAAGGGATTCCACCATATTATATCTTAGCAGTTGGAGTATATTTAATCCCAAATGTACTAGGGACCTTTCTCTTTCTATTCCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACATAATTAGACTCCTCTTATGGTGGTCACAGCCAAGAATCTATGTTGGACGAGGAATGCATGAGAGTCAATTTGCTCTCTTTAAGTACACTCTTTTCTGGGTGCTTCTTTTGACTGCCAAATTTTCATTCAGCTTTTTTGTCCAGATCAAACCTCTTGTTAAGCCAACTAAGGACATAATGAGCATTAAACATGTTGATTATGGTTGGCATGAATTTTTCCCGAATGCTCAAAATAATATTGGGGCAGTTGCTTCACTTTGGATTCCTGTAATTATGGTTTATTTCATGGACACCCAAATTTGGTATGCCATCTTCTCAACTGTGTGTGGCGGTGTTCTTGGAGCCTTCGATCGTCTGGGAGAGATACGCACTCTGTCCATGCTAAGATCACGGTTTCAGTCATTGCCTGGTGCATTCAACACATGCTTGGTTCCTACTGACAAGAGAAAAAGGAGAAAGGGATTCTCTCTCTCAAAGCGATTTGCCGAGATTCCCGCAAACAGAAGGAGTGAAGCTGCTAAATTTGCCCAATTATGGAATGAAATTATTTGCAGTTTCCGCGAGGAAGATATTATAAGTGATAGGAAAGGCCTCATAATGGATCTTTTGTTGGTTCCTTACTCATCAGATCCTGGCCTGAAAATAATTCAATGGCCACCATTTATGCTTGCAAGCAAGATTCCTATTGCACTGGATATGGCAGCTCAATTTCGAGGAAGGGACTCTGATCTTTGGAAACGCATATGTGCAGACGAATATATGAAATGTGCAGTGATTGAAAGCTATGAATCTTTCCAACATATTTTGAAGACTTTAGTGGTCGGAGATGCTGAAAAAAGGACAATCTCTGTCATCTTTAAGGAAGTTGAACACAGCATCTCTAAAAATACACTTCTTACAAATTTCCGAATGGGATTTTTGCCTTCCCTTTGCAAGAAATTTGTGGAGCTTGTGGAGCTTTTGAAAGATGCAGATTCATCCAAGCGTGACACAGTGGTGGTATTGTTGCAAGACATGTTAGAAGTGTTTACTCGTGATATGGTGGTGAATGAAATCAGCGAATTAGCAGAACTTAATCATAGTAGCAAGGATTCTGGAAGGCAACTTTTTGCTGGTACTGATGCAAAACCAGCCGTACTCTTCCCTCCAGTTGCTACAGCACAATGGGAGGAACAGATTAGACGTCTTCACTTACTGATGACGGTGAAGGAATCTGCCATTGAGGTTCCAACAAACCTTGAAGCACGAAGAAGGATTGCATTCTTTACCAATTCGCTGTTCATGAATATGCCCCGTGCTCCTAGAGTTCGTAAAATGCTCTCATTCAGTGTCATGACTCCATACTACAGTGAAGAGACTGTCTACTCGAAGAATGACCTTGAGGTTGAAAATGAAGATGGTGTCTCAATCATATATTACCTGCAGAAGATATACCCTGATGAGTGGAATAACTTCATGGAACGAATTAATTGTAAGAAAGATAGCGAGGTATGGGAAAGAGATGAGAACATATTGCAGCTACGTCATTGGGCCTCATTACGAGGGCAAACACTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGAGGGCTCTTAAGCTTCAGGCTTTTCTTGATATGGCTAACGAAAAGGAGATACTTGATGGATATAAAGCTGTTACTGTTGCATCTGAGGAAGATAAAAAGAGTCACAGATCACTATATGCCAGTTTAGAGGCTGTTGCTGACATGAAATTCACATATGTCGCTACATGTCAGAATTACGGGAATCAGAAGCGCAGTGGAGACCGCCGTGCAACAGACATCCTGAATTTGATGGTTAAcAATCCCTCACTCCGTGTGGCATATATTGATGAGGTTGAAGAAAGAGAAGGAGGAAAAGTACAAAAAGTTTATTATTCTGTACTGGTCAAAGCTGTGGACAATCATGACCAAGAAATATACCGAATAAAACTGCCAGGTCCAGCGAAGTTAGGAGAGGGGAAACCTGAAAATCAAAACCATGCAATCATTTTTACTAGAGGAGAAGCTCTTCAGACTATTGACATGAACCAGGATAATTACTTGgaagaagctttgaaaatgcgTAACCTTCTGGAGGAATTTAGTGAGGATCATGGAGTGCGCCGACCGACTATATTAGGTGTTCGTGAGCATATCTTCACTGGCAGGTCTGATTACTTCAATTCTACATACAGTGAGAATTTGTCATGTTATGTTTCCTTTTTACTTAATTCTATTACTTGCTACAGTGTTTCTTCTCTGGCTTGGTTTATGTCGAATCAAGAAACAAGCTTTGTCACAATTGGTCAAAGAGTTCTTGCAAGACCCCTGAAGGTACGATTTCACTATGGTCATCCAGACGTTTTTGATAGAATTTTCCATATTACCCGTGGAGGAATGAGTAAGGCTTCTCGAGGCATCCATTTGAGCGAGGATATTTTTGCTGGTAACATTCTTGAAACATCGTTGTTATcattgatatttgatattttttcctCCATATCTCATGCCTTATCATATGCAGGATTCAACTCAACACTACGACGTGGAAATATTACTCATCATGAATACATTCAAGTTGGAAAGGGTAGAGATGTTGGGCTCAATCAGATCTCTCTTTTTGAAGCAAAGGTGGCTTGTGGTAATGGAGAGCAAATACTAAGCAGAGATATCTACAGGCTGGGACACCGTTTTGACTTTTTCCGCATGCTATCATTTTACTTTACGACCATTGGATTTTATACCAGCTCAATGGTTGTTGTCCTTACGTCTTATGCTTTCCTATATGGCAAACTGTACCTGTCACTAAGTGGGTTTGAGGCTGCAATAATGAAGTTTGCTAAGAGAAGGGGAGATGATACATTAAAGGCGGCATTAGCTTCACAATCACTTGTCCAAATAGGACTTCTGATGACTTTGCCCATGGTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTCTAGGTGATTTCATAATAATGCAGTTGCAGCTTGCACCTGTTTTCTTCACTTTCTCGCTTGGAACGAAAATGCACTATTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAGTATAGAGCAACTGGGCGTGGGTTTGTCGTCCGCCATGAAAAGTTTGCAGACAATTACAGGATGTACTCTAGGAGTCACTTCGTCAAAGGGATGGAACTCACAATGTTGCTCATTTGTTATAAGCTTTATGGAGCAGCAGCACCTGAGTCAACTGCATACGCTCTTCTCTCATGGTCAATGTGGTTTTTGGTTTGTTCTTGGTTGTTTGCTCCTTTCCTTTTCAATCCATCAGGATTTGAGTGGCAGAAGATAGTTGAGGACTGGGAAGATTGGAGTAAATGGATGAGTAATCGAGGTGGTATTGGTATTGCTGCAAACAAGAGTTGGGAGTCATGGTGGGATGAAGAACAGGAGCATCTGCAGCACACAGGCATTGTGGGGCGGATTTGTGAGATTCTTCTTTCCTTCCGTTTCTTTATCTATCAGTATGGGATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGAGCATCATGGTTTACGCTCTTTCCTGGATAGTAATACTAGCCGTCATGATTATCTTGAAGATTATGTCCATGGGTAGAAAGAAGTTCAGTGCAGATTTCCAGTTGATGTTCCGTCTTCTCAAATTGTTTCTGTTTATTGGAGCCATTGTTTCCCTGATCTTAATGTTTACTCTTCTTAGCCTCACAACTAGTGACATCATGGCCAGTCTCTTGGCCTTTTTGCCAACAGCATGGGCAATTATACAGATAGCACAATCGTGCAGGCCTTTGGTGAAGGCTATTGGAATGTGGGGGTCAGTTAAAGCTTTAGCTAGGGGCTATGAATACCTTATGGCAGTGCTTATATTTGCACCAGTAGCCATATTGGCATGGTTTCCATTTGTTTCAGAATTCCAAACTAGGCTGCTATTTAACCAAGCATTCAGTAGAGGACTTCAAATCCAACGCATTCTCGCTGGTGGCAAGAAGCATAAACAAAACTGA	5931	0.4153	MSNLEPANQMLTRRPSRSAAMTTFSMEVFDHDVVVPSSLASITPILRVANEIESDRPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNATSLEARTKKTDAREIQSYYQQYYENYVKALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYTPFNILPLDSAGASQPIMQLEEIKAAVSALWNTRGLNWPSSFEPSRQRTGDLDLLDWLRSIFGFQKDNVRNQREHLILLLANSHIRLYPKPEPLNKLDDRAVNSVMNDLFKNYKTWCKFLGRKHSLRLPQGPENIQQRKLLYMSLYLLIWGEASNLRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGEEEAFLRRVVAPIYRVIQTEADKSRNGTAPHSAWCNYDDLNEYFWSHDCFSLGWPMRDDGEFFKSTFNLQQARKGVLHPKSTRTGKSNYVETRSFWNLFRSFDRLWTFYLLGLQAMFIIAWGDISVLEMFQKDVLYKLSSIFITAAILRLLQSILDLSLNFPVYHRWRFTDVLRNILKVIVSLFWVIILPLFYVHSFDGAPDFVKQLLSFVHQMKGIPPYYILAVGVYLIPNVLGTFLFLFPMLRRWIENSDWHIIRLLLWWSQPRIYVGRGMHESQFALFKYTLFWVLLLTAKFSFSFFVQIKPLVKPTKDIMSIKHVDYGWHEFFPNAQNNIGAVASLWIPVIMVYFMDTQIWYAIFSTVCGGVLGAFDRLGEIRTLSMLRSRFQSLPGAFNTCLVPTDKRKRRKGFSLSKRFAEIPANRRSEAAKFAQLWNEIICSFREEDIISDRKGLIMDLLLVPYSSDPGLKIIQWPPFMLASKIPIALDMAAQFRGRDSDLWKRICADEYMKCAVIESYESFQHILKTLVVGDAEKRTISVIFKEVEHSISKNTLLTNFRMGFLPSLCKKFVELVELLKDADSSKRDTVVVLLQDMLEVFTRDMVVNEISELAELNHSSKDSGRQLFAGTDAKPAVLFPPVATAQWEEQIRRLHLLMTVKESAIEVPTNLEARRRIAFFTNSLFMNMPRAPRVRKMLSFSVMTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERINCKKDSEVWERDENILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEKEILDGYKAVTVASEEDKKSHRSLYASLEAVADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFSEDHGVRRPTILGVREHIFTGRSDYFNSTYSENLSCYVSFLLNSITCYSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGMSKASRGIHLSEDIFAGNILETSLLSLIFDIFSSISHALSYAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDIYRLGHRFDFFRMLSFYFTTIGFYTSSMVVVLTSYAFLYGKLYLSLSGFEAAIMKFAKRRGDDTLKAALASQSLVQIGLLMTLPMVMEIGLERGFRTALGDFIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFADNYRMYSRSHFVKGMELTMLLICYKLYGAAAPESTAYALLSWSMWFLVCSWLFAPFLFNPSGFEWQKIVEDWEDWSKWMSNRGGIGIAANKSWESWWDEEQEHLQHTGIVGRICEILLSFRFFIYQYGIVYHLNVARGDKSIMVYALSWIVILAVMIILKIMSMGRKKFSADFQLMFRLLKLFLFIGAIVSLILMFTLLSLTTSDIMASLLAFLPTAWAIIQIAQSCRPLVKAIGMWGSVKALARGYEYLMAVLIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHKQN	1976

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu07g01322	1976	ProSitePatterns	Aminotransferases class-I pyridoxal-phosphate attachment site.	926	939	IPR004838	GO:0003824\|GO:0009058\|GO:0030170
	Tsu07g01322	1976	Pfam	1,3-beta-glucan synthase subunit FKS1, domain-1	323	434	IPR026899	-
	Tsu07g01322	1976	Gene3D	-	29	182	IPR023175	-
	Tsu07g01322	1976	Pfam	Vta1 like	41	168	IPR039431	-
	Tsu07g01322	1976	PANTHER	GLUCAN SYNTHASE-LIKE PROTEIN	1381	1451	-	-
	Tsu07g01322	1976	PANTHER	GLUCAN SYNTHASE-LIKE PROTEIN	1474	1973	-	-
	Tsu07g01322	1976	PANTHER	GLUCAN SYNTHASE-LIKE PROTEIN	5	1360	-	-
	Tsu07g01322	1976	PANTHER	LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1	1381	1451	-	-
	Tsu07g01322	1976	PANTHER	LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1	1474	1973	-	-
	Tsu07g01322	1976	PANTHER	LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1	5	1360	-	-
	Tsu07g01322	1976	Pfam	1,3-beta-glucan synthase component	1043	1129	IPR003440	GO:0000148\|GO:0003843\|GO:0006075\|GO:0016020
	Tsu07g01322	1976	Pfam	1,3-beta-glucan synthase component	1134	1451	IPR003440	GO:0000148\|GO:0003843\|GO:0006075\|GO:0016020
	Tsu07g01322	1976	Pfam	1,3-beta-glucan synthase component	1475	1789	IPR003440	GO:0000148\|GO:0003843\|GO:0006075\|GO:0016020
	Tsu07g01322	1976	SMART	FKS1_dom1_2	321	437	IPR026899	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu07g01322	Tsu-Chr7	11588377	11600983	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu07g01322	5	1976	Glycosyltransferase	AT1G05570	58.633	0.0	2369

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu07g01322	K11000		-	gmx:100777245	3380.88

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu07g01322	07	11588377	11600983	Tsu07g01322	07	11588377	11600983	ECH
	Tsu02g00657	02	5536698	5553067	Tsu07g01322	07	11588377	11600983	PCT