Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01317 atgccGATAGAAATGCCTGAAGGATTACCATTCTCAGTAGACACATGGACTCCATCTTCCAAGACCAGTAAGAGACATCATTTCCTTACTCACGCTCACAAAGATCATTCCTCAAACATCATTTCCAACTCCTCTTTCCCTATTTACTCTACTCTTCTCACCAAAACCCTTCTCCTTCAACATTACCCTAAGCTTGATCCTTCCTTGTTTCTGCAAATTGAAGTAGGTCAATCCTTCATCATCGATGATCCTGATGGAAACTTCACTGTCACCGCTTTCGATGCCAATCACTGTCCTGGTAGGGCGGTGATGTTCTTGTTTGAAGGAAAATTTGGTAATATTTTACACACAGGAGATTGCAGGCTTACCCATCAATGTTTGCTCAACTTACCTGACAATTCAGCTTATGGAACTACAAAGCAGGTTGTTAATTGTATATGGAAGCATCCTGACGCGTCGACAGTGTATCTTACCTGTGATGTCCTCGGTCAGGAAGACATCCTTGTTCAAGTGTCCCAAACATTTGGAACCAAGATATATGTTGATAAAGCCAAATATCCAGAATGTTTCAAGAATCTAGCGGTTACGGTGCCTGAAATCCTTGGTGAAGATCCATCTTCTCGTTTCCATTTATTTGATGGATCTCCGGGACTATATGAAAGAGCACAAGCAAAACTGGTTGAGGCCAAGGCAGCTTTCCAGACTGAACCTCTCGTTGTCCGCCCTTCTGCTCAGTGGTATGCTTGTGAAGAGCTCCCAGATGTTCAAAACAATAGAAAAAAGAGGATGAATGAAGCAGTTAAGGATCAATTTGGTGTTTGGCATGTCTGTTACTCAATGCACTCATCCAAGAAAGAATTGGAAGAGGCACTTCAACTTCTTGCTCCAAGGTGGGTTGTTTCAACAACCCCTCCCTGCAGGGCTATGGAGCTTAATTATGTTAAGAAATACTGTTTTAACTCTAAAGCTGGGCTCAATAACTCTGTGCTGAAGCTTCTGGATATGACTGTGGAAACTTCTGATGACGTTGATGCATTTGTCAAACCTGTAAACTGTTATCCTGGGCTTGAAGGGACCTCTCAGCCATGTCTGAAAACTAAATCACCCGTCAAGCAGTGCACTGATGCGAAAGCACTAGATGAATTGTCTCTTCCTAGTAATCGCTCGCCTGTCACATTATTTGGAAGAGCAAGGCTTGGTCTCCAAGACGTCGACTTTTTACGAGGAGGGTGTAATATTTTGCCGGGTAATCTCCCTTTGCAAACAGTTTCAAATGATGCAAGACAAAAATTATTGGATGATGCTGCTGAAGTGAAACGGGAGAGGTCATCAGGAATAAAGGAAACTTTATACAATGTGAATGATTATCAGCAATCCGAGGTTCAGGAAAACACAAGAGTTCATAAGAGTGACTCGTGTGAAAATAGTGGATCATCTGGCTTGAGTGAACATGTCAGAAAGTATTACAGGTCAATGAATCTTCCTATTCTTCGACCTCTTCCCTCATTAGTGGATCTTATGAATTCAAGGAAACGTGCCAAGTGGGGAACCAATCTTTGA 1560 0.4212 MPIEMPEGLPFSVDTWTPSSKTSKRHHFLTHAHKDHSSNIISNSSFPIYSTLLTKTLLLQHYPKLDPSLFLQIEVGQSFIIDDPDGNFTVTAFDANHCPGRAVMFLFEGKFGNILHTGDCRLTHQCLLNLPDNSAYGTTKQVVNCIWKHPDASTVYLTCDVLGQEDILVQVSQTFGTKIYVDKAKYPECFKNLAVTVPEILGEDPSSRFHLFDGSPGLYERAQAKLVEAKAAFQTEPLVVRPSAQWYACEELPDVQNNRKKRMNEAVKDQFGVWHVCYSMHSSKKELEEALQLLAPRWVVSTTPPCRAMELNYVKKYCFNSKAGLNNSVLKLLDMTVETSDDVDAFVKPVNCYPGLEGTSQPCLKTKSPVKQCTDAKALDELSLPSNRSPVTLFGRARLGLQDVDFLRGGCNILPGNLPLQTVSNDARQKLLDDAAEVKRERSSGIKETLYNVNDYQQSEVQENTRVHKSDSCENSGSSGLSEHVRKYYRSMNLPILRPLPSLVDLMNSRKRAKWGTNL 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01317 519 Pfam DNA repair metallo-beta-lactamase 200 306 IPR011084 -
Tsu07g01317 519 Gene3D - 4 173 IPR036866 -
Tsu07g01317 519 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 457 515 - -
Tsu07g01317 519 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 139 421 - -
Tsu07g01317 519 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 457 515 - -
Tsu07g01317 519 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 139 421 - -
Tsu07g01317 519 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 132 - -
Tsu07g01317 519 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 1 132 - -
Tsu07g01317 519 SUPERFAMILY Metallo-hydrolase/oxidoreductase 26 309 IPR036866 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01317 K15340 - gmx:100807948 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01317 07 11536612 11539537 Tsu07g01317 07 11536612 11539537 ECH