Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01301 ATGAACACGATGAAGAAATCCATCAACACCATCTTCACCTACTTCAAATCTTCCACTCCTCGTCGGAACCCGAATCTCTACAACCTCCATCCACGCCGTTTTAACTCCACCACTGCTCATAATCCATTCCCTTCCAATCCCATTCATGATCAAGTAATTGATTTTCCTGGAGGAAATGTTAAATTCATTCCTGAAATGAGGTTTATTTCTGAATCACTTCAGCACAGAGTTCCTTGTTACCGTGTTCTTGATGACAATGGAGAACCAATTTTAGGGACTAATTATGTGCAGGTTAGTGAAGATGTTGCTGTTAAAATGTATAATGACATGGTTGCACTTCAAACTATGGATACTATCTTCTATGAAGCACAAAGACAAGGTAGAATCTCATTTTATGTAACAACAAATGGGGAAGAAGCTATTAATATTGCATCAGCTGCAGCACTTTCCATGGATGATGTTATTTTCCCTCAGTATAGAGAACAGGGAGTCTTGTTATGGCGTGGTTTCACTttgcaagaatttgcaaatcaGTGTTTTTCCAACAAGTTTGATAATGGGAAAGGAAGGCAGATGCCGGCACATTATGGGTCCAACAAGCACAATTACATGAATGTAGCATCAACTGTTGCTACGCAAATTCCACATGCTGTTGGAGCTGCATATTCCTTAAAGATGAACAAAAAGGATGCATGTGCCGTAACTTACTTCGGAGATGGTGGTTCAAGTGAGGGAGATTTCCATGCTGGATTAAATTTTGCAGCGGTAATGGAGGCCCCAGTCATTTTTATATGCCGGAATAATGGATGGGCTATCAGCACCCCTACATCGGATCAGTTTCGAAGCGATGGTATTGTTGTGAAAGGACAGGCATATGGAGTCCGTAGCATTCGTGTAGATGGGAATGATGCTCTGGCCATTTATAGCGCTGTTCAAGCTGCTCGTCAAATGGCAGTTAGCGAAGAGAGACCAATTTTAATAGAAGTAAAATGA 993 0.4048 MNTMKKSINTIFTYFKSSTPRRNPNLYNLHPRRFNSTTAHNPFPSNPIHDQVIDFPGGNVKFIPEMRFISESLQHRVPCYRVLDDNGEPILGTNYVQVSEDVAVKMYNDMVALQTMDTIFYEAQRQGRISFYVTTNGEEAINIASAAALSMDDVIFPQYREQGVLLWRGFTLQEFANQCFSNKFDNGKGRQMPAHYGSNKHNYMNVASTVATQIPHAVGAAYSLKMNKKDACAVTYFGDGGSSEGDFHAGLNFAAVMEAPVIFICRNNGWAISTPTSDQFRSDGIVVKGQAYGVRSIRVDGNDALAIYSAVQAARQMAVSEERPILIEVK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01301 330 Pfam Dehydrogenase E1 component 110 329 IPR001017 GO:0016624
Tsu07g01301 330 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 79 330 IPR029061 -
Tsu07g01301 330 CDD TPP_E1_PDC_ADC_BCADC 106 330 - -
Tsu07g01301 330 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 30 329 - -
Tsu07g01301 330 Gene3D - 48 330 - -
Tsu07g01301 330 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 30 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01301 Tsu-Chr7 11425453 11428917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01301 51 283 Acyl Lipid Metabolism Gene Families AT5G09300 79.399 5.59e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01301 K00166 - gmx:100779198 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01301 07 11425453 11428917 Tsu07g01301 07 11425453 11428917 ECH