Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01292 ATGCAAATGGCTCCCCTAATGAACTCAAGCACTTCAACTCTTGTTCTATACTCTGCATCAAAACCAGAGGAacctaaaaaagaaaacatggtTTCTATTTTTGATTCAAATTTACTTCAAAAGCAAGTAAACATGCCAAAAGAGTTCATTTGGCCATCTAAAGACTTAGTTAACACAACTCAAGAGGAGCTAAAAGAACCTCTGATAGACTTAAGTATCATGAAAAGTGGTGATGAAGAAGCTATTGCAAGTGCTGCTGAACTTGTGAGAAAAGCATGTTTGAAACATGGTTTTTTTCAAGTTATTAATCATGGTGTTGATCAAGATCTTATTCATGATGCTTATTGTGAAACTGATTCCATTTTCAAGCTACCTTTAAGCAAGAAGCTAAGTGCTAAGAGGGTGTATGGTGGAGTCTCAGGCTACTCAGGTGCTCATGCAGATAGATATTCATCTAAGTTGCCATGGAAAGagacattttcttttgtttacaaTCATCAAAACAGTTCCAACTCTCAGATTGTTGATTACTTTGAATCTGTCTTAGGAGAAGACTTTCATGATGCAGGATGGGTGTATCAAAAGTACTGTGAAGCAATGAAGGAATTATCCCTAACAATTATGGAACTCTTGGCTATTAGTTTGGGGATAGATCGTTCTCATTATAGAAGATTTTTTGAAGATGGTGACTCAATAATGAGGTGCAACTATTATCCACCTTGCAATAGTTCTAGTATCACCCTTGGTACTGGCCCTCATTCTGACCCAACATCATTAACCATTCTTCATCAAGATCAAGTTGGAGGTTTAGAAGTTTTTGCAGATAATAAATGGATGGCTGTTCGACCTAGACATGAAGCCTTTGTCATAAACATAGGTGACACTTTTatgGCATTATCAAATGGGAGATACAAGAGTTGCCTTCACAGAGCATTAGTGAACAAATACATAGAAAGAAGGTCATTGGTTTTCTTTGTGTGTCCTAGAGAAGACAAGGTGGTGAAACCACCTCAAAATTTGCTAACAAAAAATGAAGCAAGAAAATACCCTGATTTCACATGGTCAAGTTTGTTTGAATTCACACAGAAACACTATAGGGCTGATGTTGCTACCCTCCAAAGCTTCTTTAAGTGGCATTCCTCTTCCAACTTATATTAA 1158 0.3584 MQMAPLMNSSTSTLVLYSASKPEEPKKENMVSIFDSNLLQKQVNMPKEFIWPSKDLVNTTQEELKEPLIDLSIMKSGDEEAIASAAELVRKACLKHGFFQVINHGVDQDLIHDAYCETDSIFKLPLSKKLSAKRVYGGVSGYSGAHADRYSSKLPWKETFSFVYNHQNSSNSQIVDYFESVLGEDFHDAGWVYQKYCEAMKELSLTIMELLAISLGIDRSHYRRFFEDGDSIMRCNYYPPCNSSSITLGTGPHSDPTSLTILHQDQVGGLEVFADNKWMAVRPRHEAFVINIGDTFMALSNGRYKSCLHRALVNKYIERRSLVFFVCPREDKVVKPPQNLLTKNEARKYPDFTWSSLFEFTQKHYRADVATLQSFFKWHSSSNLY 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01292 385 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 381 - -
Tsu07g01292 385 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 228 328 IPR005123 -
Tsu07g01292 385 SUPERFAMILY Clavaminate synthase-like 39 367 - -
Tsu07g01292 385 PRINTS Isopenicillin N synthase signature 253 274 - -
Tsu07g01292 385 PRINTS Isopenicillin N synthase signature 89 106 - -
Tsu07g01292 385 PRINTS Isopenicillin N synthase signature 288 314 - -
Tsu07g01292 385 Pfam 2OG-Fe(II) oxygenase superfamily 230 328 IPR044861 -
Tsu07g01292 385 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 23 381 - -
Tsu07g01292 385 Gene3D - 26 360 IPR027443 -
Tsu07g01292 385 Pfam non-haem dioxygenase in morphine synthesis N-terminal 67 170 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01292 Tsu-Chr7 11316341 11320299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01292 27 366 Glycosyltransferase AT5G59530 27.762 4.62e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01292 K05282 - gmx:100816834 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01292 07 11316341 11320299 Tsu07g01292 07 11316341 11320299 ECH