Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01278 ATGGGGACTGAAAACGGCTTTGTTCCGGAAATTACAGAAAACACAGCTATGGATTCAGCAGAGAAGAGGCTCAATGAGCTTGGTTACAAGCAAGAACTAAGAAGAGAAATGACTTTGTTCAAAACTTTGGCGATATCATTTTCAACAATGACTCTTTTCACTGGAATCACACCTTTGTATGGTTCTAGTCTTCAATATGCAGGCCCTGCAAGTCTTGTATGGGGATGGGTGGTTGTTTGTTTCTTTACTTGGTTTGTTGGGATTGCAATGGCTGAGATATGTTCATCCTTTCCGACAACTGGTTCTCTGTACTTTTGGGCTGCTCATTTAGCTGGTCCAAAATGGGGGCCATTTTCTTCTTGGTGCTGTGCTTGGCTTGAGACCATAGGTCTCATTGCTGGGGTTGGGACTCAGGCATATGCAGGATCACAAACGTTGCAAAGTATAATCCTAATATCAACAGGAACAAATAAAGGTGGAGGGTACTTTGCCCCAAAATGGCTTTTCTTATGTATGTACATTGGCCTTACAGTTATATGGGCGGCATTGAACACATTTGCATTGGAAGTCATTGCCTTCATCGATATAATTTCAATATGGTGGCAGGTTATTGGCGGAGCAGTGATAGTGATACTGTTACCTCTGGTGGCACTAACTACACAATCGGCTTCATATGTATTCACAAACTTTGAATTAGCCCCGACTACAACAGGAATATCAAGCAAACCATATGCAGTGATTCTATCATTTCTTGTGAGCCAGTATTCCCTCTATGGATATGATGCAGCAGCACATCTAACAGAAGAAACTAAAGGTGCAGACAAGAATGGACCCAAAGCAATACTAGGAAGTATTGGCATCATTTCAGTATTTGGTTGGGCTTACATCTTGGCACTTACATTCAGCATTCAGGATTTCGCTTACCTTTATGATGTAAATAATGAGACTGCTGGAGCATTCGTGCCAGCACAAATATTATATGATGCATTCCATGGAAGATATCACAATTCTGCTGGAGCAATTGTTCTACTGTTTATCATTTGGGGTTCATTCTTCTTTGGTGGACTTTCAATCACTACAAGTGCCGCTAGAGTGGTTTATGCCCTATCAAGAGATAATGGAGTTCCATTTTCATTCTTATGGCGAAAACTGCATCCAAAGTACAAGGTTCCTACAAATGCAGTATGGCTTTGTGCAGGAATCTGCATTCTTCTTGGTCTACCGATTTTGAAGGTCAATGTAGTCTTTACTGCGATAACTTCAATAGCCACAATAGGATGGGTTGGTGGTTATGCAGTTCCTATCTTTGCAAGAATGGTTATGCCTGAGAAGAACTTCAAGCCTGGACCATTTTATTTGGGCAAGGCGAGTAGACCGATATGTTTGGTAGCTTTTCTATGGATCTGTTACACATGTTCTGTATTCCTTTTGCCAACTCTTTATCCAATTACTTGGAATACTTTCAATTATGCACCAGTTGCTCTTGGGGTAGGTTTAGGTTTAATAATGCTTTGGTGGGTATTAGATGCAAGAAAATGGTTCAAGGGGCCAGTTAGGAATATTGATGATCAAAATGGCAAGGTATAA 1587 0.4083 MGTENGFVPEITENTAMDSAEKRLNELGYKQELRREMTLFKTLAISFSTMTLFTGITPLYGSSLQYAGPASLVWGWVVVCFFTWFVGIAMAEICSSFPTTGSLYFWAAHLAGPKWGPFSSWCCAWLETIGLIAGVGTQAYAGSQTLQSIILISTGTNKGGGYFAPKWLFLCMYIGLTVIWAALNTFALEVIAFIDIISIWWQVIGGAVIVILLPLVALTTQSASYVFTNFELAPTTTGISSKPYAVILSFLVSQYSLYGYDAAAHLTEETKGADKNGPKAILGSIGIISVFGWAYILALTFSIQDFAYLYDVNNETAGAFVPAQILYDAFHGRYHNSAGAIVLLFIIWGSFFFGGLSITTSAARVVYALSRDNGVPFSFLWRKLHPKYKVPTNAVWLCAGICILLGLPILKVNVVFTAITSIATIGWVGGYAVPIFARMVMPEKNFKPGPFYLGKASRPICLVAFLWICYTCSVFLLPTLYPITWNTFNYAPVALGVGLGLIMLWWVLDARKWFKGPVRNIDDQNGKV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01278 528 Gene3D Amino acid/polyamine transporter I 32 516 - -
Tsu07g01278 528 Pfam Amino acid permease 39 497 IPR002293 GO:0016020|GO:0022857|GO:0055085
Tsu07g01278 528 ProSitePatterns Amino acid permeases signature. 67 98 IPR004840 GO:0006865|GO:0016021|GO:0055085
Tsu07g01278 528 PANTHER AMINO-ACID PERMEASE BAT1 13 528 - -
Tsu07g01278 528 PANTHER OSJNBB0086G13.12 PROTEIN 13 528 - -
Tsu07g01278 528 PIRSF AA_transporter 14 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01278 Tsu-Chr7 11147165 11150370 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01278 86 521 Organic Solute Cotransporters AT2G01170 42.202 3.37e-107 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01278 - - gsj:114415811 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01278 07 11147165 11150370 Tsu07g01278 07 11147165 11150370 ECH