Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01275 ATGTTTGAACCCGAAAGCGAACCTAACCCGAGCCATGCCATAGATGGCGTCCCTTCACAACCTGATCCCGAATTCTTTGACGATGATGGCCGTCCTAAACGAACTGGAAATGTTTGGACAAGTTGCTCTCATATAATAACAGCTGTGATTGGATCTGGTGTGCTATCCTTAGCATGGGCTATAGCACAATTGGGATGGATTGCTGGTCCTGTGATGATGATCCTTTTCAGTCTCGTCACTATGTATACTTCATCAATGATGTCGGAATGCTATCGTTATGGCGATCCTATATATGGAAAGAGAAGCTATACATTCGTCGAAGCGGTTCGCAACATTCTTGGTGGGTATCATTACACGGTTTGTGGAATAGTTCAATACTTATATCTTTATGGAAGTGCAATAGGATACACAATTGCAGGTCCTATTAGCATGGTGGAAATACAAAAGTCTATATGTCTCCATAAATCAGGAGGAAAAGACCCATGTCAAATTTCAGCCAACATACATATGATCAGTTTTGGAGTAgttgaaattttcttttctcaaaTATCAGAGTTTCATAACACATGGTTTCTATCAGTAATAGCAGCAGTCATGTCTTTTGCCTATGCCATAATTGGCGTCTATCTGGCAATTTCCGTAGTTGCAAAAAACGGTACCTTCAAAGGTACTATCACAGGAGGAAGCTCTTCAAATGAGTCAACAATAGACAGAGTGTGGGGAATTTTCCAAGGTCTTGGTGACATAGCCTTTGCTTATTCATattctcaaattctcattgAAATTCAgGACACCATAAAAAGTCCACCATCTGAAGTAAAAACGATGAAGAATGCGACAAAGATAAGTGTTATCGTGACTACAACATTTTATTTGCTTTGTGGCTGCATGGGCTATGCTGCATTTGGAGCAGACGCGCCGGGGAACTTGCTCACCGGATTTAGTATGTACAATCCAGCTTGGGTCATTGATGTAGCGAATGCTGCAGTTGTTATCCACCTTGTGGGAGCATATCAAGTATATGTTCAACCTGTCTTTGCCTTCTTAGAGAAAGCTGCAGCAAAAAAATGGCCTCAAACAAAAGTAGAACACAAAATTCCAATTCCTGGTTTTAGTTATTACAATCTAAATCTATTTAGATTAATTTGGAGAACATTATTTGTGATCATAACTACTTTTGTTGCAATGTTAATTCCTTTCTTCAATGATGTTCTGGGATTTCTTGGAGCAGTCGGGTTTTGGCCTTTAACAGTTTTTTATCCAGTGGAGATGTATATCATGCAGAAGAAGATCCCAAAATGGAGTAGTAAATGGCTTTGTCTGCAAACCATAAGTGTTATATGCTTTATCATATCGACATTGGCTGCTATTGGTTCACTCGTCAGTATTGGACTTGACCTAAAGAAATACAAGCTATTTAGCACAGGAACTTGA 1434 0.3863 MFEPESEPNPSHAIDGVPSQPDPEFFDDDGRPKRTGNVWTSCSHIITAVIGSGVLSLAWAIAQLGWIAGPVMMILFSLVTMYTSSMMSECYRYGDPIYGKRSYTFVEAVRNILGGYHYTVCGIVQYLYLYGSAIGYTIAGPISMVEIQKSICLHKSGGKDPCQISANIHMISFGVVEIFFSQISEFHNTWFLSVIAAVMSFAYAIIGVYLAISVVAKNGTFKGTITGGSSSNESTIDRVWGIFQGLGDIAFAYSYSQILIEIQDTIKSPPSEVKTMKNATKISVIVTTTFYLLCGCMGYAAFGADAPGNLLTGFSMYNPAWVIDVANAAVVIHLVGAYQVYVQPVFAFLEKAAAKKWPQTKVEHKIPIPGFSYYNLNLFRLIWRTLFVIITTFVAMLIPFFNDVLGFLGAVGFWPLTVFYPVEMYIMQKKIPKWSSKWLCLQTISVICFIISTLAAIGSLVSIGLDLKKYKLFSTGT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01275 477 Pfam Transmembrane amino acid transporter protein 35 461 IPR013057 -
Tsu07g01275 477 MobiDBLite consensus disorder prediction 1 30 - -
Tsu07g01275 477 Gene3D Amino acid/polyamine transporter I 31 469 - -
Tsu07g01275 477 PANTHER OS05G0424000 PROTEIN-RELATED 11 471 - -
Tsu07g01275 477 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 11 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01275 Tsu-Chr7 11123572 11125946 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01275 15 475 Organic Solute Cotransporters AT5G09220 61.505 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01275 K24917 - gmx:100816507 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01275 07 11123572 11125946 Tsu07g01275 07 11123572 11125946 ECH