Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01265 ATGGAAAAATGGGTGTCTTTGGTTATGCTATTAGTAATAATATCAATGGAATTATTAAGTTTTGGAGTTAAAGGTGATGCAGAAGAGGTTACATATGATGGAAGATCTCTTATCATTAATGGCCAAAGAAATATTCTCTTCTCTGGTTCTATTCATTACCCCCGCAGCACCCCTcagATGTGGCCAGATTTGATAGCGAAAGCAAAACAAGGAGGATTGGATGTTATACAAACTTATGTATTTTGGAATTTACATGAACCCCAACCCGGCAAGTATGATTTCAGCGGCAGATATGACTTAGTGAGATTCATAAAAGAAATCCAAGCTCAAGGACTCTATGTTTGCCTTAGGATTGGACCTTTCATCGAAAGTGAATGGACTTACGGGGGATTCCCATTTTGGCTACATGATGTCCCTGGCATTGTCTACCGAACTGACAATGAACCATTCAAGtTCTACATGCAAAATTTTACGACAAAAATTGTGAACATGATGAAAGAAGAGGGTTTATATGCTTCACAAGGAGGCCCAATTATATTATCACAGattGAGAATGAATATCAAAACGTACAAAAGGCATTTGGCACAGCAGGATCTCAGTATGTTGAATGGGCTGCAAAAATGGCAGTGGGCCTTAATACAGGTGTACCCTGGGTTATGTGCAAGCAAACTGATGCTCCTGATCCTGTGATTAATACATGCAATGGTATGAGATGTGGAGAAACTTTTACTGGACCAAACACCCCTAATAAGCCTGCTATGTGGACAGAAAATTGGACATCTTTCTATCAAGTGTATGGTGGGTTGCCATATATACGGTCTGCTGAAGACATAGCATTTCATGTCActctttttattgcaaaaaattTCGGAAGCTTTATCAATTACTATATGTATCATGGTGGAACAAACTTTGGGAGAACAGGCTCTCCTTATACTATAACAGCTTATTATGATCAAGCACCACTTGATGAATATGGTTTGTTTAGACAACCTAAGTGGGGACATCTCAAGGAATTGCATGCTACAATCAAGTCTTGTTCCACCACTTTATTACAAGGAGTGCAGAGGAACTTTTCTTTAGGTCAACTTCAAGAGGGTTAtgtttttgaagaagaaaaaaatggaggATGTGTTGCATTCCTTATAAACAATGATCTAAGGAGGAATGTTAGTGTCCAATTCCAAAATAGTTCATATGAATTGCTCCCCAAGTCAATAAGTATCTTACCAGATTGTCAAAATGTGTCTTTCAATACTGCACATTTAAATACAACTAGCAACAGAAGGATCATAACTTCAAGACAAAACTTCAGTTCAGTTGATGATTGGGAACAGTTTCAAGATATCATTCCAAATTTTGACGACACTTCACTAAGATCAAATTCATTACTTGAACAAATGAATACAACTAAAGACATTTCTGATTATCTTTGGTATACTCTTAGATTTGAAAATAATCTATCTTGCAACGATCCGGTACTCCGCGTTCAATCTGCTGCTCATGTCGCACATGCTTTCGTGAACAACACATACATTGGAGGGTTACATGGAAATCATGATGTGAAGTTATTTACATTAGAGCTCCCAACTACATTAACAAATGGAACAAACAACATTTCTATTCTCAGCGTTATGGTCGGACTTCcgGATTCAGGAGCATTTCTTGAAAAAAGATTTGCTGGTTTAAACAATGTGGAACTTCAGTGCAGCGAAGAAGAGACTCTTAATTTGAACAATTCTACATGGGGATATCAGGTTGGATTACTTGGAGAGCAATTAGAAGTATATAAAGATCAAAATAGCAGTGACATTAAATGGACTCAACTGGGGGATATCATAATTGATGAAACTACTCTCACTTGGTACAAGGCTACATTTGACACACCTGAGGGAAATGACCCTATTGCATTAGACCTTAGCTCAATGGGGAAAGGTGAAGCTTGGGTGAATGGACAAAGCATTGGTCGCTATTGGATTTTGTTTAATAACTCCAAAGGCATTCCTTCACAATCATTGTATCATGTTCCTCGTTCTTTCCTTAAAGACAGTGAAAACATTTTGGTTTTGTTGGAGGAAGGTGGTGGGAACCCTCTTGATATTTCCTTGAACACTGTCTCAGTCACAGATTTGCAAGATAACTTTACTAATTTGCCATTCCCCACCTTTGTCTAA 2175 0.371 MEKWVSLVMLLVIISMELLSFGVKGDAEEVTYDGRSLIINGQRNILFSGSIHYPRSTPQMWPDLIAKAKQGGLDVIQTYVFWNLHEPQPGKYDFSGRYDLVRFIKEIQAQGLYVCLRIGPFIESEWTYGGFPFWLHDVPGIVYRTDNEPFKFYMQNFTTKIVNMMKEEGLYASQGGPIILSQIENEYQNVQKAFGTAGSQYVEWAAKMAVGLNTGVPWVMCKQTDAPDPVINTCNGMRCGETFTGPNTPNKPAMWTENWTSFYQVYGGLPYIRSAEDIAFHVTLFIAKNFGSFINYYMYHGGTNFGRTGSPYTITAYYDQAPLDEYGLFRQPKWGHLKELHATIKSCSTTLLQGVQRNFSLGQLQEGYVFEEEKNGGCVAFLINNDLRRNVSVQFQNSSYELLPKSISILPDCQNVSFNTAHLNTTSNRRIITSRQNFSSVDDWEQFQDIIPNFDDTSLRSNSLLEQMNTTKDISDYLWYTLRFENNLSCNDPVLRVQSAAHVAHAFVNNTYIGGLHGNHDVKLFTLELPTTLTNGTNNISILSVMVGLPDSGAFLEKRFAGLNNVELQCSEEETLNLNNSTWGYQVGLLGEQLEVYKDQNSSDIKWTQLGDIIIDETTLTWYKATFDTPEGNDPIALDLSSMGKGEAWVNGQSIGRYWILFNNSKGIPSQSLYHVPRSFLKDSENILVLLEEGGGNPLDISLNTVSVTDLQDNFTNLPFPTFV 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01265 724 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 292 307 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 Gene3D Glycosidases 27 348 - -
Tsu07g01265 724 PANTHER BETA-GALACTOSIDASE 6 27 717 - -
Tsu07g01265 724 PANTHER BETA-GALACTOSIDASE RELATED 27 717 IPR001944 GO:0004553|GO:0005975
Tsu07g01265 724 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Tsu07g01265 724 Pfam Beta-galactosidase jelly roll domain 616 691 IPR025300 -
Tsu07g01265 724 SUPERFAMILY Galactose-binding domain-like 582 709 IPR008979 -
Tsu07g01265 724 Pfam Glycosyl hydrolases family 35 36 343 IPR031330 -
Tsu07g01265 724 Gene3D - 579 715 - -
Tsu07g01265 724 Pfam Beta-sandwich domain in beta galactosidase 351 422 IPR041392 -
Tsu07g01265 724 SUPERFAMILY Galactose-binding domain-like 407 563 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01265 Tsu-Chr7 11056092 11062360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01265 1 709 Glycoside Hydrolase AT5G63800 62.623 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01265 - - gmx:100818637 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01265 07 11056092 11062360 Tsu07g01265 07 11056092 11062360 ECH