Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01251 ATGGCTACACAAAATTGTTCAAAATGTGTCATGTTGGTGACACTATTAGTAACAATTCTCTTTATTCATCCAACATCCTCAACATCAAGAGGATCTCTCAAGCATCACAAAATTTCTCAAGGCGGGTTCCGAGTCACTCTTCGCCATGTTGATTCGGGCAAAAACTTGACGAAACTCGAGCGAGTTCAACATGGCATCAACCGAGGACATAGCCGACTACAAAGACTTAACGCAATGGTTTTAGCCGCTTCAACAACTCAAGATTCTTCTCAATTGGAAGCACCAATTCACGCCGGAAACGGTGAGTATCTAATGGAATTATCGATTGGAACGCCGCCAATTTCTTACCCTGCAGTTTTGGACACAGGAAGTGATCTCATTTGGACTCAATGTAAGCCTTGTTCACAATGTTACAAACAACCAACACCAATCTTTGATCCAAAAAAATCTTCAACTTTTTCTAAACTCTCATGTAGTAGTCATCTATGCAACGCTTTACCTTCCTCATCTTGCAGCAACAATGTTTGCAATTATGATTATTCATATGGTGATTATTCATCAACACAAGGTATTTTAGGTAGTGAAACATTCACTTTtggtgatgataaaaaaaaccaagtttctGTTAAAAACATTGGTTTTGGTTGTGGTGAAGACAATGAAGGACAAGGCTTTGAACAAGCATCAGGTTTGGTTGGATTAGGACGTGGTCCTTTATCTTTGGTTTctcaattaaaagaacaaaaattctCTTATTGTTTAACCTCAATGGATGACACAAAAGAAAGTGTTCTTTTGTTAGGTTCTGTTGCAAATGTTAATGTTACAAAACATGTCACAACACCACTTATTAAAAATCCATTACAACCATCTTTTTATTATCTTTCACTTGAAGGAATCACTGTTGGTGACACAAGATTATCAATTGAGAAATCAACTTTTGATGTTAGTGATGATGGAAGTGGTGGAGTGATTATAGATTCTGGCACAACAATTACATACATTGAAGAAAATGCTTTTGATACATTAAAGAAAGAGTTTATTTCGCAAACAAAATTACCGGTCGATAAATCAGGTTCGACCGGTTTAGATGTTTGTTTTACTTTACCATCAGGGAAAACAGAAGTTGAAATTCCTAAgttggtttttcattttaaaggtGGTGATTTGGAATTACCTGGTGAAAATTATATGATTGCTGATTCAAGTTTAGGTGTTGGTTGTTTAGCTATGGGAGCTTCTAATGGAATGTCTATATTTGGTCTAATAGGACCTGGCCTTGCCCGTCCACATCAGCAAGGCATGTTTCCCACGTGCTCCTCTACACGAGGACGCATGCTCATCAAAGCTTATCCCTTATCCTTGATAAGCGGAGCAGCTTTGACCCAGGATGAAAACCTGTAA 1404 0.3625 MATQNCSKCVMLVTLLVTILFIHPTSSTSRGSLKHHKISQGGFRVTLRHVDSGKNLTKLERVQHGINRGHSRLQRLNAMVLAASTTQDSSQLEAPIHAGNGEYLMELSIGTPPISYPAVLDTGSDLIWTQCKPCSQCYKQPTPIFDPKKSSTFSKLSCSSHLCNALPSSSCSNNVCNYDYSYGDYSSTQGILGSETFTFGDDKKNQVSVKNIGFGCGEDNEGQGFEQASGLVGLGRGPLSLVSQLKEQKFSYCLTSMDDTKESVLLLGSVANVNVTKHVTTPLIKNPLQPSFYYLSLEGITVGDTRLSIEKSTFDVSDDGSGGVIIDSGTTITYIEENAFDTLKKEFISQTKLPVDKSGSTGLDVCFTLPSGKTEVEIPKLVFHFKGGDLELPGENYMIADSSLGVGCLAMGASNGMSIFGLIGPGLARPHQQGMFPTCSSTRGRMLIKAYPLSLISGAALTQDENL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01251 467 Gene3D Acid Proteases 267 425 IPR021109 -
Tsu07g01251 467 CDD pepsin_A_like_plant 102 436 IPR034161 -
Tsu07g01251 467 Gene3D Acid Proteases 80 266 IPR021109 -
Tsu07g01251 467 ProSiteProfiles Peptidase family A1 domain profile. 103 446 IPR033121 -
Tsu07g01251 467 PANTHER OS07G0603500 PROTEIN-RELATED 15 423 - -
Tsu07g01251 467 PANTHER OS08G0469000 PROTEIN 15 423 - -
Tsu07g01251 467 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 324 335 IPR001969 GO:0004190|GO:0006508
Tsu07g01251 467 Pfam Xylanase inhibitor N-terminal 103 269 IPR032861 -
Tsu07g01251 467 Pfam Xylanase inhibitor C-terminal 293 421 IPR032799 -
Tsu07g01251 467 PRINTS Pepsin (A1) aspartic protease family signature 324 335 IPR001461 GO:0004190|GO:0006508
Tsu07g01251 467 PRINTS Pepsin (A1) aspartic protease family signature 109 129 IPR001461 GO:0004190|GO:0006508
Tsu07g01251 467 SUPERFAMILY Acid proteases 96 421 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01251 Tsu-Chr7 10861472 10863233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01251 101 424 Miscellaneous Gene Families AT1G77480 28.852 2.31e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01251 - - gmx:100811294 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01251 07 10861472 10863233 Tsu07g01251 07 10861472 10863233 ECH