Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01246 ATGCAATCCTTTCGCAACgttcaaaataaaaacgaaTCGGGTTCATCATCGGTGAACCAATCAGCCACCCCGTTTCGCTCCCTCTCGACCTGCAATCGGACTAGTCGCACCTCTACATTAAACCGTCCGCCGGTTCAACGATCCGCTTCTGCGAGATTGGCTCGTCAAAACACCTCTCGCGAGGTGATGCTTAATGATATCGTTGGTAATGGAATCTCCGGTATTCTACATAAGTGGGTTAACTATGGCCGAGGGTGGCGACCTCGTTGGTTCGTCCTCCACGACGGTGTTTTATCATATTACAAAATTCATGGTCCTGATAAACTCATTCTCAATCGTGATGTTGAAAATCAATCTAAAGTTATTGGCGATGAGTCCCTCCGCCGTATTGCTAGCGACCGTAATTCTCCCTCTCGCAACCGCAAACCTGTCAGCGAAATCCACCTCACgGTGTGTTCTGTGCGTGAGAACAAAACAGATGAAAGAAGGTTTTCTATATGCACCGGAACAAAGAAGAGAATACATTTAAGAGCAGAAAGTAAAGAAGACAGAACAATGTGGATGGAGGCAATGATGGCAGTGAAAAGCATGTATCCTAGATTACCAACAACTCAAGATGTTTTGTCTCCTTCAGCTTCTGTAGTGATTTCTACTGACAAGTTAAGACAAAGACTTTTGCAAGAGGGTGTGAATGAGGTTTTAATTCGTGAATGTGAAGATATCATGAGAGCTGAGTTATTTCAGTTACATACTTATATTGTTGCTCTTAAGCAGAAACAATTGTTACTCACTGATACACTTCGTAATTTAGAGACAGAGAAGGTTGACTTGGAGAACACGCTTGTTGAAGACCAAAAACACTCCAAGGAAGAAGGAGATTCCTATCTATCAACACAAGAAGATAGTGATGGAAGTGGAAGTGAATATTCAGATGAGCAAAATAGAAACGATCAATCCGACGACGACGAGACCGATGCATTCTTCGATACATATGAAATTCTTTCATCAACAAATAATGAAGAGGCATCTAGTCCACCAAGAGAATGTGATTCAAAATCGACTAATGAATTTAACTATCCTTATGTCGATAGAAGAAAGAAGTTGCCTGATCCTAATGAGAAAGAAACTGGAGTTAGTTTATGGTCAATAATAAAAGACAATATTGGAAAAGATCTTACAAAAGTTTGTCTTCCAGTTTATTTTAATGAACCAATCTCCTCATTGCAAAAATGTTTTGAAGATTTGGAATATTCTCACCTTCTAGATCAAGCATATGAATGTGGTAAAAGGGGTGACAATCTAATGAGGATACTCTATCTGGCTGCATTTGCAGTTTCAGGGTATGCTAACACTAGTGGTAGAAGTTGCAAACCATTTAATCCATTATTGGGTGAGACATATGAGGCAGATTATCCGGATAAAGGCCTACGTTTTATCTCTGAGAAGGTGAGTCATCATCCTATGGTTGTAGCATGTCATTGTGAGGGTCGTGGTTGGAAATTTTGGGGTGAtagtattttaaaaagtaaattttgggGTCGTTCAATTCAACTTGATCCCATTGGTATTTTGACTGTGGAGTTTGATGATGGAGAAATTTTCTATTGGAGTAAGGTGACAACATCCATTTACAATCTCATTTTAGGAAAACTCTATTGTGACCATTATGGTACAATGAGAATAGAGGGGAATCGTGAGCATTCATGTAAGGTTAAATTCAAGGAGCAATCAATCATTGATAGAAATCCTCACCAGGTTCATGGCACAGTGGAAGATAAGAAGGGGAAAACAGCAGCTACTCTATTTGGAAAGTGGGATGATAGCTTACATTACATAATTGGAGGACATTCTGGAAAAGGAAAAGGGTCCAATATGTCATCAAAACCACATATGTTGTGGAAGAAAAACCAGTTACCAGAGCAACAAACAAGATATAATCTTACAGAATTTGCTCTTACACTAAATGAAATCACACCTGGTCTAAAGGAGAAATTGCCACCAACTGATTCAAGGCTAAGGCCTGATCAAAGATGTTTGGAGAATGGACAATATGAAAAAGCCAATTCTGAAAAATTACGGTTGGAACAAAGACAAAGACAGGCACGAAAGATGCAAGAGAAAGGTTGGAAACCAAAGTGGTTTGCCAAGGAAAAAGGCAATAATACTTATCGTTATGTTGGTGGATATTGGGAGACTAGAGAAAAGGGCAATTGGGAATCTTGTCCTGACATTTTTGGCCAATTCTCAAATGATACTGATCAAGAATCTAAATTAGGTTCATAA 2283 0.3881 MQSFRNVQNKNESGSSSVNQSATPFRSLSTCNRTSRTSTLNRPPVQRSASARLARQNTSREVMLNDIVGNGISGILHKWVNYGRGWRPRWFVLHDGVLSYYKIHGPDKLILNRDVENQSKVIGDESLRRIASDRNSPSRNRKPVSEIHLTVCSVRENKTDERRFSICTGTKKRIHLRAESKEDRTMWMEAMMAVKSMYPRLPTTQDVLSPSASVVISTDKLRQRLLQEGVNEVLIRECEDIMRAELFQLHTYIVALKQKQLLLTDTLRNLETEKVDLENTLVEDQKHSKEEGDSYLSTQEDSDGSGSEYSDEQNRNDQSDDDETDAFFDTYEILSSTNNEEASSPPRECDSKSTNEFNYPYVDRRKKLPDPNEKETGVSLWSIIKDNIGKDLTKVCLPVYFNEPISSLQKCFEDLEYSHLLDQAYECGKRGDNLMRILYLAAFAVSGYANTSGRSCKPFNPLLGETYEADYPDKGLRFISEKVSHHPMVVACHCEGRGWKFWGDSILKSKFWGRSIQLDPIGILTVEFDDGEIFYWSKVTTSIYNLILGKLYCDHYGTMRIEGNREHSCKVKFKEQSIIDRNPHQVHGTVEDKKGKTAATLFGKWDDSLHYIIGGHSGKGKGSNMSSKPHMLWKKNQLPEQQTRYNLTEFALTLNEITPGLKEKLPPTDSRLRPDQRCLENGQYEKANSEKLRLEQRQRQARKMQEKGWKPKWFAKEKGNNTYRYVGGYWETREKGNWESCPDIFGQFSNDTDQESKLGS 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01246 760 Gene3D - 70 198 IPR011993 -
Tsu07g01246 760 Pfam Oxysterol-binding protein 379 734 IPR000648 GO:0008289
Tsu07g01246 760 Coils Coil 267 287 - -
Tsu07g01246 760 Gene3D - 465 647 - -
Tsu07g01246 760 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 15 750 - -
Tsu07g01246 760 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 15 750 IPR000648 GO:0008289
Tsu07g01246 760 Pfam PH domain 72 193 IPR001849 -
Tsu07g01246 760 MobiDBLite consensus disorder prediction 335 356 - -
Tsu07g01246 760 MobiDBLite consensus disorder prediction 281 296 - -
Tsu07g01246 760 MobiDBLite consensus disorder prediction 281 323 - -
Tsu07g01246 760 Coils Coil 684 707 - -
Tsu07g01246 760 SUPERFAMILY Oxysterol-binding protein-like 374 750 IPR037239 -
Tsu07g01246 760 ProSiteProfiles PH domain profile. 69 196 IPR001849 -
Tsu07g01246 760 SUPERFAMILY PH domain-like 72 210 - -
Tsu07g01246 760 MobiDBLite consensus disorder prediction 1 54 - -
Tsu07g01246 760 Gene3D - 676 747 - -
Tsu07g01246 760 SMART PH_update 70 198 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01246 Tsu-Chr7 10810561 10815954 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01246 K20456 - gmx:100781218 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01246 07 10810561 10815954 Tsu07g01246 07 10810561 10815954 ECH