Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01244 ATGATGAAGTTTCCAACTTCAACTCCTGCCACGTCATCACCTTCTACTTCTTCCTCCTATACACTCAAACCTCCTCCATGTCTTACTCATGCTTCTCCTAATTTCAAACGTCCTATGCTGTTGCCACAAACAATCTGTGCCTCTCAAAAAAAGTCCTTCTGCTCTGGAGCCCATGTGGAGACTTCTGTAAACTGTAATCCCGTGAAAAATTACGCAACAGCCAGTTTTTCTCCACGGCGATCTGAAGCAAAATTCTTGGTTTCCAACCAATCACTCAACAAACACTCATTCTCAGTGGGAGCTTTAGTAACTCCAACAGCTCAAGATGTTTCCGATACAAGTACAACTCTTACTGCTGATGATAAGATTGGAGTGTTATTGCTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTgcaaccttttttatttaaccTTTTTGCTGACCCGGATATTATACGATTGCCAAGAATATTTAGTTTTCTTCAAAAGCCACTGGCCCAATTTGTATCTGTTCTAAGGGCTCCAAAGAGCAGAGAAGGCTATGCTTCAATTGGCGGTGGTTCTCCTCTTAGACGTATAACCGATGCACAGGCTGAAGagttaaaaaaatctctttcgGAAAAGAATGTCCCCGCTGAAGTGTACGTTGGCATGCGTTACTGGCATCCATTCACCGAGGAAGCTATTGAACAGATTAAAAAAGATGGAATTACAAAGCTGGTCGTTCTCCCACTTTATCCACAATTTTCAATATCAACCAGTGGCTCGAGCTTACGTCTACTGGAGAGTATATTCCGAGATGATGCGTATCTAGTCAACATGCAGCACACAGTATTACCTTCATGGTATCAACGTGAAGGATACATAAAGGCCAtgtcaaatttaattgaaaaagagCTGAAGAGTTTCGACTGCCCTAAGGAGGTCATGATATTCTTTAGTGCACATGGGGTGCCTCTTGCTTATGTGGAAGAGGCCGGCGATCCATACAAGGCAGAAATGGAGGAATGTGTGGATTTAATCATGGAAGAACTTGAGACAAGAAAGATAAGCAATGCCTTCACCCTTGCCTATCAGAGTAGAGTTGGACCAGTGGAATGGTTAAAACCATATACAGACGTGACAATAGTTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGCTGGCTGTTCCAATTAGCTTTGTCAGTGAACATATTGAAACACTAGAAGAAATAGATGTTGAATACAAAGAATTGGCTCTAGAATCTGGTATAGAAAAGTGGGGCCGTGTTCCTGCTCTAGGATGTGAACCCTCCTTcatttctgatttggcagatgcTGTTATTGAAAGTCTTCCGTATGTTGGTGCCATGGCAGTTTCAAACCTCCAAGCTCGACAGCCATTGGTTCCGCTCGGAAGCGTAGAGGAGTTATTGGCAGCATACGACTCGCAACATAGGGAGTTGCCATCGCCAGTGATAGTGTGGGAATGGGGTTTGACAAAAAGTGCCGAAACTTGGAATGGAAGGGTAGCTATGTTGGCTGTGCtgcttcttttgttttttgaagtCACTACACCGGATAGTGTTTTTCACCAGTTGGGAATATTACCGCCTGCGCTTAGGTGA 1611 0.4122 MMKFPTSTPATSSPSTSSSYTLKPPPCLTHASPNFKRPMLLPQTICASQKKSFCSGAHVETSVNCNPVKNYATASFSPRRSEAKFLVSNQSLNKHSFSVGALVTPTAQDVSDTSTTLTADDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVLRAPKSREGYASIGGGSPLRRITDAQAEELKKSLSEKNVPAEVYVGMRYWHPFTEEAIEQIKKDGITKLVVLPLYPQFSISTSGSSLRLLESIFRDDAYLVNMQHTVLPSWYQREGYIKAMSNLIEKELKSFDCPKEVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELETRKISNAFTLAYQSRVGPVEWLKPYTDVTIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPSFISDLADAVIESLPYVGAMAVSNLQARQPLVPLGSVEELLAAYDSQHRELPSPVIVWEWGLTKSAETWNGRVAMLAVLLLLFFEVTTPDSVFHQLGILPPALR 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01244 536 TIGRFAM hemH: ferrochelatase 120 446 IPR001015 GO:0004325|GO:0006783
Tsu07g01244 536 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 57 456 - -
Tsu07g01244 536 SUPERFAMILY Chelatase 121 452 - -
Tsu07g01244 536 ProSitePatterns Ferrochelatase signature. 312 333 IPR019772 GO:0004325|GO:0006783
Tsu07g01244 536 CDD Ferrochelatase_C 291 429 IPR033644 -
Tsu07g01244 536 CDD Ferrochelatase_N 123 285 IPR033659 -
Tsu07g01244 536 Pfam Ferrochelatase 122 445 IPR001015 GO:0004325|GO:0006783
Tsu07g01244 536 Gene3D - 122 445 - -
Tsu07g01244 536 Gene3D - 284 427 - -
Tsu07g01244 536 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g01244 536 Hamap Coproporphyrin III ferrochelatase [cpfC]. 121 446 IPR001015 GO:0004325|GO:0006783
Tsu07g01244 536 PANTHER FERROCHELATASE 57 456 IPR001015 GO:0004325|GO:0006783
Tsu07g01244 536 SUPERFAMILY Chlorophyll a-b binding protein 490 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01244 Tsu-Chr7 10794258 10798826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01244 K01772 - gmx:100785669 857.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01244 07 10794258 10798826 Tsu07g01244 07 10794258 10798826 ECH
Tsu02g00582 02 4905067 4911649 Tsu07g01244 07 10794258 10798826 PCT